Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm28666-201ENSMUST00000186649 274 ntBASIC10.21□□□□□ -0.77
Trim41Q5NCC3 Gm19921-201ENSMUST00000210505 703 ntBASIC10.21□□□□□ -0.77
Trim41Q5NCC3 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC10.21□□□□□ -0.77
Trim41Q5NCC3 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trim41Q5NCC3 CT571268.1-201ENSMUST00000222320 407 ntBASIC10.21□□□□□ -0.77
Trim41Q5NCC3 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Trim41Q5NCC3 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trim41Q5NCC3 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trim41Q5NCC3 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Trim41Q5NCC3 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trim41Q5NCC3 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trim41Q5NCC3 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trim41Q5NCC3 Gm15215-201ENSMUST00000117773 489 ntBASIC10.2□□□□□ -0.78
Trim41Q5NCC3 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC10.2□□□□□ -0.78
Trim41Q5NCC3 Gm12722-201ENSMUST00000118507 493 ntBASIC10.2□□□□□ -0.78
Trim41Q5NCC3 Gm14815-201ENSMUST00000120060 488 ntBASIC10.2□□□□□ -0.78
Trim41Q5NCC3 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trim41Q5NCC3 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trim41Q5NCC3 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trim41Q5NCC3 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC10.2□□□□□ -0.78
Trim41Q5NCC3 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC10.2□□□□□ -0.78
Trim41Q5NCC3 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Trim41Q5NCC3 Gm9457-201ENSMUST00000180176 372 ntBASIC10.2□□□□□ -0.78
Trim41Q5NCC3 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Trim41Q5NCC3 Gm27875-201ENSMUST00000184425 123 ntBASIC10.2□□□□□ -0.78
Trim41Q5NCC3 Mir7062-201ENSMUST00000185038 66 ntBASIC10.2□□□□□ -0.78
Trim41Q5NCC3 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trim41Q5NCC3 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trim41Q5NCC3 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC10.2□□□□□ -0.78
Trim41Q5NCC3 Ighv1-35-201ENSMUST00000195265 351 ntBASIC10.2□□□□□ -0.78
Trim41Q5NCC3 Gm8523-201ENSMUST00000211386 552 ntBASIC10.2□□□□□ -0.78
Trim41Q5NCC3 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trim41Q5NCC3 AC154592.1-201ENSMUST00000225784 574 ntBASIC10.2□□□□□ -0.78
Trim41Q5NCC3 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trim41Q5NCC3 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trim41Q5NCC3 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trim41Q5NCC3 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trim41Q5NCC3 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trim41Q5NCC3 Gm37652-201ENSMUST00000195290 2095 ntBASIC10.19□□□□□ -0.78
Trim41Q5NCC3 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trim41Q5NCC3 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Trim41Q5NCC3 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trim41Q5NCC3 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trim41Q5NCC3 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trim41Q5NCC3 Gm12149-201ENSMUST00000117511 654 ntBASIC10.19□□□□□ -0.78
Trim41Q5NCC3 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC10.19□□□□□ -0.78
Trim41Q5NCC3 Gm17528-201ENSMUST00000171026 239 ntBASIC10.19□□□□□ -0.78
Trim41Q5NCC3 Gm23191-201ENSMUST00000179147 107 ntBASIC10.19□□□□□ -0.78
Trim41Q5NCC3 Gm24306-201ENSMUST00000180229 79 ntBASIC10.19□□□□□ -0.78
Trim41Q5NCC3 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC10.19□□□□□ -0.78
Trim41Q5NCC3 Gm45660-201ENSMUST00000210267 151 ntBASIC10.19□□□□□ -0.78
Trim41Q5NCC3 AC121966.1-201ENSMUST00000221458 282 ntBASIC10.19□□□□□ -0.78
Trim41Q5NCC3 Gm7042-201ENSMUST00000223027 384 ntBASIC10.19□□□□□ -0.78
Trim41Q5NCC3 AC135377.1-201ENSMUST00000223692 463 ntBASIC10.19□□□□□ -0.78
Trim41Q5NCC3 AC183096.1-201ENSMUST00000226392 130 ntBASIC10.19□□□□□ -0.78
Trim41Q5NCC3 Gm23624-201ENSMUST00000082463 321 ntBASIC10.19□□□□□ -0.78
Trim41Q5NCC3 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trim41Q5NCC3 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC10.19□□□□□ -0.78
Trim41Q5NCC3 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trim41Q5NCC3 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trim41Q5NCC3 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC10.19□□□□□ -0.78
Trim41Q5NCC3 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trim41Q5NCC3 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trim41Q5NCC3 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trim41Q5NCC3 Gm15425-201ENSMUST00000119013 2711 ntBASIC10.19□□□□□ -0.78
Trim41Q5NCC3 Gm37913-201ENSMUST00000192925 2544 ntBASIC10.18□□□□□ -0.78
Trim41Q5NCC3 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Trim41Q5NCC3 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trim41Q5NCC3 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Trim41Q5NCC3 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim41Q5NCC3 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim41Q5NCC3 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim41Q5NCC3 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim41Q5NCC3 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim41Q5NCC3 Gm24578-201ENSMUST00000103970 129 ntBASIC10.18□□□□□ -0.78
Trim41Q5NCC3 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC10.18□□□□□ -0.78
Trim41Q5NCC3 Gm12782-201ENSMUST00000117519 727 ntBASIC10.18□□□□□ -0.78
Trim41Q5NCC3 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trim41Q5NCC3 Gm25339-201ENSMUST00000157458 232 ntBASIC10.18□□□□□ -0.78
Trim41Q5NCC3 Gm29124-201ENSMUST00000186576 452 ntBASIC10.18□□□□□ -0.78
Trim41Q5NCC3 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trim41Q5NCC3 Gm43739-201ENSMUST00000198294 307 ntBASIC10.18□□□□□ -0.78
Trim41Q5NCC3 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Trim41Q5NCC3 Gm6009-201ENSMUST00000210848 280 ntBASIC10.18□□□□□ -0.78
Trim41Q5NCC3 AC124408.2-201ENSMUST00000228168 645 ntBASIC10.18□□□□□ -0.78
Trim41Q5NCC3 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trim41Q5NCC3 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC10.18□□□□□ -0.78
Trim41Q5NCC3 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim41Q5NCC3 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim41Q5NCC3 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim41Q5NCC3 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trim41Q5NCC3 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim41Q5NCC3 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim41Q5NCC3 Gm44043-201ENSMUST00000203426 3253 ntBASIC10.18□□□□□ -0.78
Trim41Q5NCC3 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Trim41Q5NCC3 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim41Q5NCC3 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Trim41Q5NCC3 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim41Q5NCC3 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Trim41Q5NCC3 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 105.2 ms