Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Upf3bQ3ULL6 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Upf3bQ3ULL6 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC4.25□□□□□ -1.73
Upf3bQ3ULL6 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Upf3bQ3ULL6 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Upf3bQ3ULL6 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 Gm4736-201ENSMUST00000100870 380 ntBASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 Gm14229-201ENSMUST00000121178 850 ntBASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 Gm15780-201ENSMUST00000121283 935 ntBASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 Gm22816-201ENSMUST00000157450 117 ntBASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 Gm7241-201ENSMUST00000159853 357 ntBASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 Gm17421-201ENSMUST00000167845 674 ntBASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 Gm23633-201ENSMUST00000175293 119 ntBASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 n-TSaga9-201ENSMUST00000197675 107 ntBASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 Gm45523-201ENSMUST00000210712 799 ntBASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 Gm20946-201ENSMUST00000212367 461 ntBASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 AC153932.1-201ENSMUST00000218558 787 ntBASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 CT030242.2-201ENSMUST00000221588 148 ntBASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 AC124524.2-201ENSMUST00000223940 588 ntBASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 AC159256.1-201ENSMUST00000224298 1039 ntBASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 Mir370-201ENSMUST00000083499 79 ntBASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 n-R5s54-201ENSMUST00000083837 112 ntBASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 AC154323.3-201ENSMUST00000226927 1660 ntBASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC4.24□□□□□ -1.73
Upf3bQ3ULL6 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Gm12586-201ENSMUST00000117328 1316 ntBASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Gm23273-201ENSMUST00000104058 135 ntBASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Gm6893-201ENSMUST00000118385 522 ntBASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Gm14753-201ENSMUST00000118503 246 ntBASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Gm13532-201ENSMUST00000120373 240 ntBASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Gm11931-201ENSMUST00000121630 447 ntBASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Gm13852-201ENSMUST00000122350 242 ntBASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Gm25966-201ENSMUST00000157169 117 ntBASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Gm23228-201ENSMUST00000157296 270 ntBASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Mir6899-201ENSMUST00000184798 64 ntBASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Gm29281-201ENSMUST00000188077 381 ntBASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Gm7449-201ENSMUST00000194393 663 ntBASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Gm45031-201ENSMUST00000206800 288 ntBASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Gm44650-201ENSMUST00000206929 194 ntBASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 AC158536.1-201ENSMUST00000222510 256 ntBASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Upf3bQ3ULL6 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Upf3bQ3ULL6 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Upf3bQ3ULL6 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Upf3bQ3ULL6 Gm24281-201ENSMUST00000104234 136 ntBASIC4.22□□□□□ -1.73
Upf3bQ3ULL6 Gm23133-201ENSMUST00000104255 135 ntBASIC4.22□□□□□ -1.73
Upf3bQ3ULL6 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Upf3bQ3ULL6 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC4.22□□□□□ -1.73
Upf3bQ3ULL6 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms