Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 AC116797.2-201ENSMUST00000224763 4221 ntBASIC6.93□□□□□ -1.3
Col17a1Q07563 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
Col17a1Q07563 Zfp389-201ENSMUST00000118425 675 ntBASIC6.93□□□□□ -1.3
Col17a1Q07563 Gm11410-201ENSMUST00000120053 1143 ntBASIC6.93□□□□□ -1.3
Col17a1Q07563 Gm14623-201ENSMUST00000121398 603 ntBASIC6.93□□□□□ -1.3
Col17a1Q07563 Gm24382-201ENSMUST00000122698 107 ntBASIC6.93□□□□□ -1.3
Col17a1Q07563 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC6.93□□□□□ -1.3
Col17a1Q07563 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC6.93□□□□□ -1.3
Col17a1Q07563 Gm3191-201ENSMUST00000167139 346 ntBASIC6.93□□□□□ -1.3
Col17a1Q07563 Gm29064-201ENSMUST00000187014 813 ntBASIC6.93□□□□□ -1.3
Col17a1Q07563 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC6.93□□□□□ -1.3
Col17a1Q07563 Gm44865-201ENSMUST00000207240 531 ntBASIC6.93□□□□□ -1.3
Col17a1Q07563 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC6.93□□□□□ -1.3
Col17a1Q07563 AC154552.5-201ENSMUST00000222352 207 ntBASIC6.93□□□□□ -1.3
Col17a1Q07563 CT572983.1-201ENSMUST00000226895 514 ntBASIC6.93□□□□□ -1.3
Col17a1Q07563 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Col17a1Q07563 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Col17a1Q07563 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col17a1Q07563 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Col17a1Q07563 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
Col17a1Q07563 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Col17a1Q07563 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Col17a1Q07563 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col17a1Q07563 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Col17a1Q07563 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Col17a1Q07563 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Col17a1Q07563 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col17a1Q07563 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col17a1Q07563 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Col17a1Q07563 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col17a1Q07563 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC6.93□□□□□ -1.3
Col17a1Q07563 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col17a1Q07563 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC6.93□□□□□ -1.3
Col17a1Q07563 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Col17a1Q07563 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC6.92□□□□□ -1.3
Col17a1Q07563 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Col17a1Q07563 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Col17a1Q07563 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Col17a1Q07563 Gm25908-201ENSMUST00000157624 98 ntBASIC6.92□□□□□ -1.3
Col17a1Q07563 Gm24190-201ENSMUST00000157976 216 ntBASIC6.92□□□□□ -1.3
Col17a1Q07563 Gm25861-201ENSMUST00000158251 109 ntBASIC6.92□□□□□ -1.3
Col17a1Q07563 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Col17a1Q07563 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC6.92□□□□□ -1.3
Col17a1Q07563 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC6.92□□□□□ -1.3
Col17a1Q07563 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC6.92□□□□□ -1.3
Col17a1Q07563 Gm18177-201ENSMUST00000188373 404 ntBASIC6.92□□□□□ -1.3
Col17a1Q07563 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col17a1Q07563 Gm4410-201ENSMUST00000199349 686 ntBASIC6.92□□□□□ -1.3
Col17a1Q07563 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC6.92□□□□□ -1.3
Col17a1Q07563 Gm6261-201ENSMUST00000204707 760 ntBASIC6.92□□□□□ -1.3
Col17a1Q07563 Gm29774-201ENSMUST00000219270 436 ntBASIC6.92□□□□□ -1.3
Col17a1Q07563 Gm8672-201ENSMUST00000221200 332 ntBASIC6.92□□□□□ -1.3
Col17a1Q07563 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col17a1Q07563 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Col17a1Q07563 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Col17a1Q07563 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Col17a1Q07563 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Col17a1Q07563 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Col17a1Q07563 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Col17a1Q07563 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Col17a1Q07563 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Col17a1Q07563 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC6.92□□□□□ -1.3
Col17a1Q07563 Gm43523-201ENSMUST00000197397 2878 ntBASIC6.92□□□□□ -1.3
Col17a1Q07563 Gm11692-201ENSMUST00000122121 902 ntBASIC6.92□□□□□ -1.3
Col17a1Q07563 Gm25557-201ENSMUST00000158084 315 ntBASIC6.92□□□□□ -1.3
Col17a1Q07563 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC6.92□□□□□ -1.3
Col17a1Q07563 Gm27468-201ENSMUST00000183577 106 ntBASIC6.92□□□□□ -1.3
Col17a1Q07563 Gm29600-201ENSMUST00000188687 377 ntBASIC6.92□□□□□ -1.3
Col17a1Q07563 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC6.92□□□□□ -1.3
Col17a1Q07563 Gm37438-201ENSMUST00000192813 393 ntBASIC6.92□□□□□ -1.3
Col17a1Q07563 Gm38360-201ENSMUST00000195130 454 ntBASIC6.92□□□□□ -1.3
Col17a1Q07563 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC6.92□□□□□ -1.3
Col17a1Q07563 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC6.92□□□□□ -1.3
Col17a1Q07563 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC6.92□□□□□ -1.3
Col17a1Q07563 Gm17911-201ENSMUST00000210806 877 ntBASIC6.92□□□□□ -1.3
Col17a1Q07563 Gm6929-201ENSMUST00000210930 468 ntBASIC6.92□□□□□ -1.3
Col17a1Q07563 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC6.92□□□□□ -1.3
Col17a1Q07563 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC6.92□□□□□ -1.3
Col17a1Q07563 AC139638.1-201ENSMUST00000218027 364 ntBASIC6.92□□□□□ -1.3
Col17a1Q07563 AC102815.1-201ENSMUST00000226662 1061 ntBASIC6.92□□□□□ -1.3
Col17a1Q07563 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col17a1Q07563 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC6.92□□□□□ -1.3
Col17a1Q07563 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC6.92□□□□□ -1.3
Col17a1Q07563 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Col17a1Q07563 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Col17a1Q07563 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Col17a1Q07563 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Col17a1Q07563 Gm19666-201ENSMUST00000198176 1893 ntBASIC6.91□□□□□ -1.3
Col17a1Q07563 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.91□□□□□ -1.3
Col17a1Q07563 AC164297.4-201ENSMUST00000224225 1307 ntBASIC6.91□□□□□ -1.3
Col17a1Q07563 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col17a1Q07563 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col17a1Q07563 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
Col17a1Q07563 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Col17a1Q07563 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col17a1Q07563 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Col17a1Q07563 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC6.91□□□□□ -1.3
Col17a1Q07563 Gm13172-201ENSMUST00000118685 256 ntBASIC6.91□□□□□ -1.3
Col17a1Q07563 Gm11357-201ENSMUST00000119758 954 ntBASIC6.91□□□□□ -1.3
Col17a1Q07563 Gm16458-201ENSMUST00000121428 502 ntBASIC6.91□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms