Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 AC118639.1-201ENSMUST00000227204 338 ntBASIC6.47□□□□□ -1.37
Col9a1Q05722 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Col9a1Q05722 Gm5265-201ENSMUST00000076828 342 ntBASIC6.47□□□□□ -1.37
Col9a1Q05722 CT009757.5-201ENSMUST00000221858 3425 ntBASIC6.47□□□□□ -1.37
Col9a1Q05722 AC134577.3-201ENSMUST00000226490 3000 ntBASIC6.47□□□□□ -1.37
Col9a1Q05722 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC6.47□□□□□ -1.37
Col9a1Q05722 AC144772.1-201ENSMUST00000226372 2398 ntBASIC6.47□□□□□ -1.37
Col9a1Q05722 Xpnpep2-201ENSMUST00000077775 3498 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col9a1Q05722 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col9a1Q05722 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
Col9a1Q05722 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC6.47□□□□□ -1.37
Col9a1Q05722 Rian-209ENSMUST00000182406 3476 ntBASIC6.46□□□□□ -1.37
Col9a1Q05722 AC135119.1-202ENSMUST00000228435 2203 ntBASIC6.46□□□□□ -1.37
Col9a1Q05722 Gm44045-201ENSMUST00000204906 2520 ntBASIC6.46□□□□□ -1.37
Col9a1Q05722 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
Col9a1Q05722 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Col9a1Q05722 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
Col9a1Q05722 Gm44130-201ENSMUST00000205157 3004 ntBASIC6.46□□□□□ -1.38
Col9a1Q05722 Gm25758-201ENSMUST00000103987 129 ntBASIC6.46□□□□□ -1.38
Col9a1Q05722 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Col9a1Q05722 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC6.46□□□□□ -1.38
Col9a1Q05722 Gm12852-201ENSMUST00000119478 719 ntBASIC6.46□□□□□ -1.38
Col9a1Q05722 Gm14877-201ENSMUST00000119803 478 ntBASIC6.46□□□□□ -1.38
Col9a1Q05722 Gm14202-201ENSMUST00000120121 311 ntBASIC6.46□□□□□ -1.38
Col9a1Q05722 Gm25058-201ENSMUST00000157365 128 ntBASIC6.46□□□□□ -1.38
Col9a1Q05722 Gm22097-201ENSMUST00000157929 278 ntBASIC6.46□□□□□ -1.38
Col9a1Q05722 Gm23050-201ENSMUST00000158775 165 ntBASIC6.46□□□□□ -1.38
Col9a1Q05722 Gm16232-201ENSMUST00000162856 167 ntBASIC6.46□□□□□ -1.38
Col9a1Q05722 Gm17149-201ENSMUST00000164712 375 ntBASIC6.46□□□□□ -1.38
Col9a1Q05722 Gm17183-201ENSMUST00000171170 493 ntBASIC6.46□□□□□ -1.38
Col9a1Q05722 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC6.46□□□□□ -1.38
Col9a1Q05722 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Col9a1Q05722 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Col9a1Q05722 Gm26057-201ENSMUST00000178099 165 ntBASIC6.46□□□□□ -1.38
Col9a1Q05722 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Col9a1Q05722 Kcnmb2-203ENSMUST00000178668 2917 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Col9a1Q05722 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Col9a1Q05722 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC6.46□□□□□ -1.38
Col9a1Q05722 Gm37997-201ENSMUST00000193515 267 ntBASIC6.46□□□□□ -1.38
Col9a1Q05722 Gm44471-201ENSMUST00000197963 100 ntBASIC6.46□□□□□ -1.38
Col9a1Q05722 Gm19126-201ENSMUST00000207896 509 ntBASIC6.46□□□□□ -1.38
Col9a1Q05722 Gm45296-201ENSMUST00000209625 205 ntBASIC6.46□□□□□ -1.38
Col9a1Q05722 Gm9292-201ENSMUST00000222008 710 ntBASIC6.46□□□□□ -1.38
Col9a1Q05722 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Col9a1Q05722 Gm5899-201ENSMUST00000071770 270 ntBASIC6.46□□□□□ -1.38
Col9a1Q05722 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Col9a1Q05722 Mir143-201ENSMUST00000083511 63 ntBASIC6.46□□□□□ -1.38
Col9a1Q05722 n-R5s46-201ENSMUST00000083960 116 ntBASIC6.46□□□□□ -1.38
Col9a1Q05722 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Col9a1Q05722 Olfr1-201ENSMUST00000120303 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Col9a1Q05722 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Col9a1Q05722 Gm38284-201ENSMUST00000194803 4539 ntBASIC6.46□□□□□ -1.38
Col9a1Q05722 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Col9a1Q05722 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.38
Col9a1Q05722 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Col9a1Q05722 Gm43831-201ENSMUST00000200461 2598 ntBASIC6.46□□□□□ -1.38
Col9a1Q05722 Gm37022-201ENSMUST00000192517 2254 ntBASIC6.46□□□□□ -1.38
Col9a1Q05722 Gm43637-201ENSMUST00000202206 2926 ntBASIC6.46□□□□□ -1.38
Col9a1Q05722 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Col9a1Q05722 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
Col9a1Q05722 Gm28667-201ENSMUST00000189873 2171 ntBASIC6.45□□□□□ -1.38
Col9a1Q05722 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col9a1Q05722 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col9a1Q05722 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC6.45□□□□□ -1.38
Col9a1Q05722 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col9a1Q05722 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col9a1Q05722 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col9a1Q05722 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col9a1Q05722 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col9a1Q05722 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col9a1Q05722 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC6.45□□□□□ -1.38
Col9a1Q05722 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col9a1Q05722 Gm14296-202ENSMUST00000108931 750 ntBASIC6.45□□□□□ -1.38
Col9a1Q05722 Gm13329-201ENSMUST00000117063 265 ntBASIC6.45□□□□□ -1.38
Col9a1Q05722 Gm13729-201ENSMUST00000120328 406 ntBASIC6.45□□□□□ -1.38
Col9a1Q05722 Gm11679-201ENSMUST00000121830 779 ntBASIC6.45□□□□□ -1.38
Col9a1Q05722 Gm25013-201ENSMUST00000158402 128 ntBASIC6.45□□□□□ -1.38
Col9a1Q05722 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC6.45□□□□□ -1.38
Col9a1Q05722 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC6.45□□□□□ -1.38
Col9a1Q05722 Gm26318-201ENSMUST00000176507 96 ntBASIC6.45□□□□□ -1.38
Col9a1Q05722 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC6.45□□□□□ -1.38
Col9a1Q05722 Gm9696-202ENSMUST00000191541 830 ntBASIC6.45□□□□□ -1.38
Col9a1Q05722 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC6.45□□□□□ -1.38
Col9a1Q05722 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC6.45□□□□□ -1.38
Col9a1Q05722 Gm45367-201ENSMUST00000210171 347 ntBASIC6.45□□□□□ -1.38
Col9a1Q05722 AC153954.2-201ENSMUST00000213811 287 ntBASIC6.45□□□□□ -1.38
Col9a1Q05722 AC159709.1-201ENSMUST00000220445 349 ntBASIC6.45□□□□□ -1.38
Col9a1Q05722 AC163357.1-201ENSMUST00000220847 233 ntBASIC6.45□□□□□ -1.38
Col9a1Q05722 AC211878.2-201ENSMUST00000222486 488 ntBASIC6.45□□□□□ -1.38
Col9a1Q05722 CT009510.2-203ENSMUST00000226704 2136 ntBASIC6.45□□□□□ -1.38
Col9a1Q05722 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Col9a1Q05722 Mir452-201ENSMUST00000093629 85 ntBASIC6.45□□□□□ -1.38
Col9a1Q05722 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC6.45□□□□□ -1.38
Col9a1Q05722 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col9a1Q05722 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col9a1Q05722 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col9a1Q05722 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC6.45□□□□□ -1.38
Col9a1Q05722 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col9a1Q05722 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col9a1Q05722 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms