Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC5.45□□□□□ -1.54
Sox9Q04887 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC5.45□□□□□ -1.54
Sox9Q04887 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC5.45□□□□□ -1.54
Sox9Q04887 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC5.45□□□□□ -1.54
Sox9Q04887 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC5.45□□□□□ -1.54
Sox9Q04887 Gm26993-201ENSMUST00000182766 789 ntBASIC5.45□□□□□ -1.54
Sox9Q04887 Gm27539-201ENSMUST00000184971 224 ntBASIC5.45□□□□□ -1.54
Sox9Q04887 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Sox9Q04887 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC5.45□□□□□ -1.54
Sox9Q04887 Gm34015-201ENSMUST00000194908 451 ntBASIC5.45□□□□□ -1.54
Sox9Q04887 Gm43444-201ENSMUST00000198123 291 ntBASIC5.45□□□□□ -1.54
Sox9Q04887 Gm43841-201ENSMUST00000199491 586 ntBASIC5.45□□□□□ -1.54
Sox9Q04887 Gm44634-201ENSMUST00000206119 152 ntBASIC5.45□□□□□ -1.54
Sox9Q04887 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC5.45□□□□□ -1.54
Sox9Q04887 AC069561.3-201ENSMUST00000217321 114 ntBASIC5.45□□□□□ -1.54
Sox9Q04887 AC116589.1-201ENSMUST00000220634 327 ntBASIC5.45□□□□□ -1.54
Sox9Q04887 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.45□□□□□ -1.54
Sox9Q04887 AC161609.1-201ENSMUST00000225878 474 ntBASIC5.45□□□□□ -1.54
Sox9Q04887 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
Sox9Q04887 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Sox9Q04887 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC5.45□□□□□ -1.54
Sox9Q04887 Gm6104-201ENSMUST00000078030 603 ntBASIC5.45□□□□□ -1.54
Sox9Q04887 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Sox9Q04887 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Sox9Q04887 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Sox9Q04887 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Sox9Q04887 AC164102.1-201ENSMUST00000220524 1553 ntBASIC5.45□□□□□ -1.54
Sox9Q04887 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Sox9Q04887 AC151734.1-201ENSMUST00000227023 1740 ntBASIC5.45□□□□□ -1.54
Sox9Q04887 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Sox9Q04887 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC5.45□□□□□ -1.54
Sox9Q04887 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Sox9Q04887 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.45□□□□□ -1.54
Sox9Q04887 Gm38189-201ENSMUST00000194495 1457 ntBASIC5.45□□□□□ -1.54
Sox9Q04887 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Sox9Q04887 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC5.44□□□□□ -1.54
Sox9Q04887 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Sox9Q04887 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sox9Q04887 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC5.44□□□□□ -1.54
Sox9Q04887 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sox9Q04887 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sox9Q04887 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Sox9Q04887 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Sox9Q04887 Gm14628-201ENSMUST00000117508 635 ntBASIC5.44□□□□□ -1.54
Sox9Q04887 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC5.44□□□□□ -1.54
Sox9Q04887 Gm14998-201ENSMUST00000120502 495 ntBASIC5.44□□□□□ -1.54
Sox9Q04887 Gm13162-201ENSMUST00000121481 454 ntBASIC5.44□□□□□ -1.54
Sox9Q04887 Gm14411-201ENSMUST00000121798 914 ntBASIC5.44□□□□□ -1.54
Sox9Q04887 Gm22199-201ENSMUST00000122660 126 ntBASIC5.44□□□□□ -1.54
Sox9Q04887 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC5.44□□□□□ -1.54
Sox9Q04887 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC5.44□□□□□ -1.54
Sox9Q04887 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC5.44□□□□□ -1.54
Sox9Q04887 Gm24910-201ENSMUST00000157289 272 ntBASIC5.44□□□□□ -1.54
Sox9Q04887 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
Sox9Q04887 Gm4845-201ENSMUST00000179202 562 ntBASIC5.44□□□□□ -1.54
Sox9Q04887 Gm5734-201ENSMUST00000189787 913 ntBASIC5.44□□□□□ -1.54
Sox9Q04887 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC5.44□□□□□ -1.54
Sox9Q04887 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC5.44□□□□□ -1.54
Sox9Q04887 Gm36954-201ENSMUST00000195362 363 ntBASIC5.44□□□□□ -1.54
Sox9Q04887 Gm42805-201ENSMUST00000196158 276 ntBASIC5.44□□□□□ -1.54
Sox9Q04887 Gm43237-201ENSMUST00000196835 1044 ntBASIC5.44□□□□□ -1.54
Sox9Q04887 BX530055.1-201ENSMUST00000197285 122 ntBASIC5.44□□□□□ -1.54
Sox9Q04887 Trav15d-3-201ENSMUST00000198604 167 ntBASIC5.44□□□□□ -1.54
Sox9Q04887 Gm43487-201ENSMUST00000200331 1031 ntBASIC5.44□□□□□ -1.54
Sox9Q04887 Olfr1309-201ENSMUST00000207885 964 ntBASIC5.44□□□□□ -1.54
Sox9Q04887 Gm3816-201ENSMUST00000209803 433 ntBASIC5.44□□□□□ -1.54
Sox9Q04887 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Sox9Q04887 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC5.44□□□□□ -1.54
Sox9Q04887 AC166902.1-201ENSMUST00000216653 517 ntBASIC5.44□□□□□ -1.54
Sox9Q04887 Gm46312-201ENSMUST00000220961 420 ntBASIC5.44□□□□□ -1.54
Sox9Q04887 AC154552.4-201ENSMUST00000222171 151 ntBASIC5.44□□□□□ -1.54
Sox9Q04887 CT025689.2-201ENSMUST00000224979 429 ntBASIC5.44□□□□□ -1.54
Sox9Q04887 AC160999.1-201ENSMUST00000225675 810 ntBASIC5.44□□□□□ -1.54
Sox9Q04887 CT572983.1-201ENSMUST00000226895 514 ntBASIC5.44□□□□□ -1.54
Sox9Q04887 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sox9Q04887 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Sox9Q04887 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Sox9Q04887 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Sox9Q04887 n-R5s65-201ENSMUST00000082614 117 ntBASIC5.44□□□□□ -1.54
Sox9Q04887 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sox9Q04887 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
Sox9Q04887 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Sox9Q04887 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Sox9Q04887 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sox9Q04887 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
Sox9Q04887 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sox9Q04887 Gm37509-201ENSMUST00000194867 3169 ntBASIC5.44□□□□□ -1.54
Sox9Q04887 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC5.44□□□□□ -1.54
Sox9Q04887 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sox9Q04887 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Sox9Q04887 AC124746.1-201ENSMUST00000227535 1300 ntBASIC5.44□□□□□ -1.54
Sox9Q04887 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sox9Q04887 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
Sox9Q04887 Gm4759-201ENSMUST00000183414 6622 ntBASIC5.43□□□□□ -1.54
Sox9Q04887 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.43□□□□□ -1.54
Sox9Q04887 Gm5155-201ENSMUST00000072381 2841 ntBASIC5.43□□□□□ -1.54
Sox9Q04887 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Sox9Q04887 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Sox9Q04887 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.43□□□□□ -1.54
Sox9Q04887 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms