Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm10997-201ENSMUST00000210294 1500 ntBASIC3.49□□□□□ -1.85
Nkx3-1P97436 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Nkx3-1P97436 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Nkx3-1P97436 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Nkx3-1P97436 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
Nkx3-1P97436 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Nkx3-1P97436 Gm3972-201ENSMUST00000173960 2861 ntBASIC3.48□□□□□ -1.85
Nkx3-1P97436 Gm13230-201ENSMUST00000120870 1575 ntBASIC3.48□□□□□ -1.85
Nkx3-1P97436 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Nkx3-1P97436 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Nkx3-1P97436 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
Nkx3-1P97436 Gm14991-201ENSMUST00000119913 598 ntBASIC3.48□□□□□ -1.85
Nkx3-1P97436 Gm14845-201ENSMUST00000121259 306 ntBASIC3.48□□□□□ -1.85
Nkx3-1P97436 Gm11692-201ENSMUST00000122121 902 ntBASIC3.48□□□□□ -1.85
Nkx3-1P97436 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC3.48□□□□□ -1.85
Nkx3-1P97436 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Nkx3-1P97436 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Nkx3-1P97436 Gm28614-201ENSMUST00000186483 458 ntBASIC3.48□□□□□ -1.85
Nkx3-1P97436 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC3.48□□□□□ -1.85
Nkx3-1P97436 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC3.48□□□□□ -1.85
Nkx3-1P97436 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC3.48□□□□□ -1.85
Nkx3-1P97436 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Nkx3-1P97436 AC158641.1-201ENSMUST00000218933 229 ntBASIC3.48□□□□□ -1.85
Nkx3-1P97436 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC3.48□□□□□ -1.85
Nkx3-1P97436 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Nkx3-1P97436 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Nkx3-1P97436 Mir370-201ENSMUST00000083499 79 ntBASIC3.48□□□□□ -1.85
Nkx3-1P97436 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
Nkx3-1P97436 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC3.48□□□□□ -1.85
Nkx3-1P97436 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Nkx3-1P97436 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
Nkx3-1P97436 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Nkx3-1P97436 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Nkx3-1P97436 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Nkx3-1P97436 Gm37011-201ENSMUST00000195543 2935 ntBASIC3.47□□□□□ -1.85
Nkx3-1P97436 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Nkx3-1P97436 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Nkx3-1P97436 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Nkx3-1P97436 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Nkx3-1P97436 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
Nkx3-1P97436 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Nkx3-1P97436 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Nkx3-1P97436 Gm23133-201ENSMUST00000104255 135 ntBASIC3.47□□□□□ -1.85
Nkx3-1P97436 Gm24403-201ENSMUST00000104616 130 ntBASIC3.47□□□□□ -1.85
Nkx3-1P97436 Gm15021-201ENSMUST00000117832 742 ntBASIC3.47□□□□□ -1.85
Nkx3-1P97436 Gm13478-201ENSMUST00000118312 413 ntBASIC3.47□□□□□ -1.85
Nkx3-1P97436 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.47□□□□□ -1.85
Nkx3-1P97436 Gm11349-201ENSMUST00000122209 1116 ntBASIC3.47□□□□□ -1.85
Nkx3-1P97436 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC3.47□□□□□ -1.85
Nkx3-1P97436 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Nkx3-1P97436 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Nkx3-1P97436 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC3.47□□□□□ -1.85
Nkx3-1P97436 Gm22792-201ENSMUST00000157225 133 ntBASIC3.47□□□□□ -1.85
Nkx3-1P97436 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC3.47□□□□□ -1.85
Nkx3-1P97436 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Nkx3-1P97436 Gm6245-201ENSMUST00000164699 768 ntBASIC3.47□□□□□ -1.85
Nkx3-1P97436 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Nkx3-1P97436 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Nkx3-1P97436 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC3.47□□□□□ -1.85
Nkx3-1P97436 Gm43491-201ENSMUST00000197133 784 ntBASIC3.47□□□□□ -1.85
Nkx3-1P97436 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC3.47□□□□□ -1.85
Nkx3-1P97436 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Nkx3-1P97436 Olfr1309-201ENSMUST00000207885 964 ntBASIC3.47□□□□□ -1.85
Nkx3-1P97436 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Nkx3-1P97436 Gm21112-201ENSMUST00000212224 578 ntBASIC3.47□□□□□ -1.85
Nkx3-1P97436 Gm7760-201ENSMUST00000212265 578 ntBASIC3.47□□□□□ -1.85
Nkx3-1P97436 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC3.47□□□□□ -1.85
Nkx3-1P97436 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.47□□□□□ -1.85
Nkx3-1P97436 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.47□□□□□ -1.85
Nkx3-1P97436 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC3.47□□□□□ -1.85
Nkx3-1P97436 AC129202.3-201ENSMUST00000224413 733 ntBASIC3.47□□□□□ -1.85
Nkx3-1P97436 AC140368.1-202ENSMUST00000226131 658 ntBASIC3.47□□□□□ -1.85
Nkx3-1P97436 AC134864.1-201ENSMUST00000226326 511 ntBASIC3.47□□□□□ -1.85
Nkx3-1P97436 AC140209.1-201ENSMUST00000227875 284 ntBASIC3.47□□□□□ -1.85
Nkx3-1P97436 AC100733.1-201ENSMUST00000228494 407 ntBASIC3.47□□□□□ -1.85
Nkx3-1P97436 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Nkx3-1P97436 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Nkx3-1P97436 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Nkx3-1P97436 Snord14e-201ENSMUST00000082857 90 ntBASIC3.47□□□□□ -1.85
Nkx3-1P97436 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Nkx3-1P97436 AC154462.1-201ENSMUST00000228897 2260 ntBASIC3.47□□□□□ -1.85
Nkx3-1P97436 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Nkx3-1P97436 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Nkx3-1P97436 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Nkx3-1P97436 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Nkx3-1P97436 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
Nkx3-1P97436 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Nkx3-1P97436 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
Nkx3-1P97436 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.85
Nkx3-1P97436 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC3.46□□□□□ -1.85
Nkx3-1P97436 Gm44434-201ENSMUST00000203918 3745 ntBASIC3.46□□□□□ -1.85
Nkx3-1P97436 Gm45160-201ENSMUST00000207112 3099 ntBASIC3.46□□□□□ -1.86
Nkx3-1P97436 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC3.46□□□□□ -1.86
Nkx3-1P97436 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC3.46□□□□□ -1.86
Nkx3-1P97436 Gm4596-201ENSMUST00000117197 442 ntBASIC3.46□□□□□ -1.86
Nkx3-1P97436 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Nkx3-1P97436 Gm11262-201ENSMUST00000119326 833 ntBASIC3.46□□□□□ -1.86
Nkx3-1P97436 Gm6071-201ENSMUST00000119561 440 ntBASIC3.46□□□□□ -1.86
Nkx3-1P97436 Gm5060-201ENSMUST00000120072 599 ntBASIC3.46□□□□□ -1.86
Nkx3-1P97436 Gm14649-201ENSMUST00000121814 324 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms