Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SgcbP82349 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC5.28□□□□□ -1.56
SgcbP82349 Gm16205-201ENSMUST00000117720 1027 ntBASIC5.28□□□□□ -1.56
SgcbP82349 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC5.28□□□□□ -1.56
SgcbP82349 Gm13973-201ENSMUST00000121371 894 ntBASIC5.28□□□□□ -1.56
SgcbP82349 Gm14237-201ENSMUST00000122080 430 ntBASIC5.28□□□□□ -1.56
SgcbP82349 Gm9428-201ENSMUST00000127214 769 ntBASIC5.28□□□□□ -1.56
SgcbP82349 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC5.28□□□□□ -1.56
SgcbP82349 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC5.28□□□□□ -1.56
SgcbP82349 Gm24687-201ENSMUST00000157758 241 ntBASIC5.28□□□□□ -1.56
SgcbP82349 Gm22518-201ENSMUST00000158267 68 ntBASIC5.28□□□□□ -1.56
SgcbP82349 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC5.28□□□□□ -1.56
SgcbP82349 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC5.28□□□□□ -1.56
SgcbP82349 Mir3112-201ENSMUST00000175431 82 ntBASIC5.28□□□□□ -1.56
SgcbP82349 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SgcbP82349 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SgcbP82349 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SgcbP82349 Gm28995-201ENSMUST00000186625 261 ntBASIC5.28□□□□□ -1.56
SgcbP82349 Gm38224-201ENSMUST00000191648 2100 ntBASIC5.28□□□□□ -1.56
SgcbP82349 AC136146.1-201ENSMUST00000196180 91 ntBASIC5.28□□□□□ -1.56
SgcbP82349 Ass-ps1-201ENSMUST00000197717 761 ntBASIC5.28□□□□□ -1.56
SgcbP82349 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC5.28□□□□□ -1.56
SgcbP82349 Gm42886-201ENSMUST00000199214 466 ntBASIC5.28□□□□□ -1.56
SgcbP82349 Gm18791-201ENSMUST00000204611 726 ntBASIC5.28□□□□□ -1.56
SgcbP82349 Gm5027-201ENSMUST00000206700 375 ntBASIC5.28□□□□□ -1.56
SgcbP82349 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC5.28□□□□□ -1.56
SgcbP82349 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC5.28□□□□□ -1.56
SgcbP82349 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC5.28□□□□□ -1.56
SgcbP82349 AC119894.1-201ENSMUST00000220399 350 ntBASIC5.28□□□□□ -1.56
SgcbP82349 CT571268.1-201ENSMUST00000222320 407 ntBASIC5.28□□□□□ -1.56
SgcbP82349 AC154788.1-201ENSMUST00000225003 340 ntBASIC5.28□□□□□ -1.56
SgcbP82349 AC165092.4-201ENSMUST00000225025 679 ntBASIC5.28□□□□□ -1.56
SgcbP82349 AC122393.3-201ENSMUST00000226343 1059 ntBASIC5.28□□□□□ -1.56
SgcbP82349 AC114572.1-201ENSMUST00000227262 300 ntBASIC5.28□□□□□ -1.56
SgcbP82349 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
SgcbP82349 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SgcbP82349 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SgcbP82349 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SgcbP82349 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SgcbP82349 Gm38284-201ENSMUST00000194803 4539 ntBASIC5.28□□□□□ -1.56
SgcbP82349 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC5.28□□□□□ -1.56
SgcbP82349 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SgcbP82349 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC5.27□□□□□ -1.57
SgcbP82349 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SgcbP82349 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SgcbP82349 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SgcbP82349 Gm44676-201ENSMUST00000208520 3055 ntBASIC5.27□□□□□ -1.57
SgcbP82349 Gm15425-201ENSMUST00000119013 2711 ntBASIC5.27□□□□□ -1.57
SgcbP82349 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SgcbP82349 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SgcbP82349 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SgcbP82349 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SgcbP82349 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC5.27□□□□□ -1.57
SgcbP82349 Gm42541-201ENSMUST00000199871 2249 ntBASIC5.27□□□□□ -1.57
SgcbP82349 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC5.27□□□□□ -1.57
SgcbP82349 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SgcbP82349 AC155298.1-201ENSMUST00000225350 3250 ntBASIC5.27□□□□□ -1.57
SgcbP82349 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SgcbP82349 Gm10936-201ENSMUST00000105264 252 ntBASIC5.27□□□□□ -1.57
SgcbP82349 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SgcbP82349 Gm13531-201ENSMUST00000121893 543 ntBASIC5.27□□□□□ -1.57
SgcbP82349 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC5.27□□□□□ -1.57
SgcbP82349 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC5.27□□□□□ -1.57
SgcbP82349 Gm26106-201ENSMUST00000157254 228 ntBASIC5.27□□□□□ -1.57
SgcbP82349 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC5.27□□□□□ -1.57
SgcbP82349 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SgcbP82349 Gm15970-201ENSMUST00000160623 834 ntBASIC5.27□□□□□ -1.57
SgcbP82349 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SgcbP82349 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SgcbP82349 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC5.27□□□□□ -1.57
SgcbP82349 Gm25246-201ENSMUST00000175476 69 ntBASIC5.27□□□□□ -1.57
SgcbP82349 Gm22932-201ENSMUST00000175510 72 ntBASIC5.27□□□□□ -1.57
SgcbP82349 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SgcbP82349 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SgcbP82349 Mir6973b-201ENSMUST00000184185 80 ntBASIC5.27□□□□□ -1.57
SgcbP82349 Gm28257-201ENSMUST00000185244 463 ntBASIC5.27□□□□□ -1.57
SgcbP82349 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC5.27□□□□□ -1.57
SgcbP82349 Gm19641-201ENSMUST00000188432 417 ntBASIC5.27□□□□□ -1.57
SgcbP82349 Gm37527-201ENSMUST00000192406 3547 ntBASIC5.27□□□□□ -1.57
SgcbP82349 Gm44494-201ENSMUST00000196760 129 ntBASIC5.27□□□□□ -1.57
SgcbP82349 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.27□□□□□ -1.57
SgcbP82349 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SgcbP82349 Gm19252-201ENSMUST00000204705 305 ntBASIC5.27□□□□□ -1.57
SgcbP82349 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC5.27□□□□□ -1.57
SgcbP82349 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SgcbP82349 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC5.27□□□□□ -1.57
SgcbP82349 Gm6009-201ENSMUST00000210848 280 ntBASIC5.27□□□□□ -1.57
SgcbP82349 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SgcbP82349 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
SgcbP82349 Gm18541-201ENSMUST00000215935 538 ntBASIC5.27□□□□□ -1.57
SgcbP82349 AC157570.3-201ENSMUST00000219281 205 ntBASIC5.27□□□□□ -1.57
SgcbP82349 AC164567.2-201ENSMUST00000219363 445 ntBASIC5.27□□□□□ -1.57
SgcbP82349 Gm18116-201ENSMUST00000220920 537 ntBASIC5.27□□□□□ -1.57
SgcbP82349 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SgcbP82349 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SgcbP82349 Gm5612-201ENSMUST00000053326 375 ntBASIC5.27□□□□□ -1.57
SgcbP82349 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SgcbP82349 AC156031.1-201ENSMUST00000217288 2555 ntBASIC5.27□□□□□ -1.57
SgcbP82349 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SgcbP82349 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 167.5 ms