Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm19366-201ENSMUST00000206996 156 ntBASIC4.04□□□□□ -1.76
Sox3P53784 Gm36371-201ENSMUST00000209043 1103 ntBASIC4.04□□□□□ -1.76
Sox3P53784 Gm44543-201ENSMUST00000209136 396 ntBASIC4.04□□□□□ -1.76
Sox3P53784 AC153801.1-201ENSMUST00000217904 947 ntBASIC4.04□□□□□ -1.76
Sox3P53784 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC4.04□□□□□ -1.76
Sox3P53784 Gm9309-201ENSMUST00000223537 546 ntBASIC4.04□□□□□ -1.76
Sox3P53784 AC164883.9-201ENSMUST00000228042 399 ntBASIC4.04□□□□□ -1.76
Sox3P53784 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Sox3P53784 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Sox3P53784 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
Sox3P53784 Gm26072-201ENSMUST00000083135 107 ntBASIC4.04□□□□□ -1.76
Sox3P53784 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Sox3P53784 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Sox3P53784 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Sox3P53784 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Sox3P53784 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.04□□□□□ -1.76
Sox3P53784 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
Sox3P53784 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
Sox3P53784 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.04□□□□□ -1.76
Sox3P53784 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.04□□□□□ -1.76
Sox3P53784 Gm13100-201ENSMUST00000117157 1439 ntBASIC4.04□□□□□ -1.76
Sox3P53784 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Sox3P53784 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Sox3P53784 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC4.03□□□□□ -1.76
Sox3P53784 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Sox3P53784 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.03□□□□□ -1.76
Sox3P53784 Gm7834-201ENSMUST00000117560 437 ntBASIC4.03□□□□□ -1.76
Sox3P53784 Gm15426-201ENSMUST00000117823 556 ntBASIC4.03□□□□□ -1.76
Sox3P53784 Gm9043-201ENSMUST00000119677 314 ntBASIC4.03□□□□□ -1.76
Sox3P53784 Gm12335-201ENSMUST00000119738 327 ntBASIC4.03□□□□□ -1.76
Sox3P53784 Gm14687-201ENSMUST00000120206 363 ntBASIC4.03□□□□□ -1.76
Sox3P53784 Gm25104-201ENSMUST00000122476 163 ntBASIC4.03□□□□□ -1.76
Sox3P53784 Gm10059-201ENSMUST00000131139 171 ntBASIC4.03□□□□□ -1.76
Sox3P53784 Gm22084-201ENSMUST00000157585 105 ntBASIC4.03□□□□□ -1.76
Sox3P53784 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
Sox3P53784 Samd15-201ENSMUST00000169669 1194 ntBASIC4.03□□□□□ -1.76
Sox3P53784 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Sox3P53784 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Sox3P53784 Gm27254-201ENSMUST00000183926 517 ntBASIC4.03□□□□□ -1.76
Sox3P53784 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Sox3P53784 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC4.03□□□□□ -1.76
Sox3P53784 Gm18303-201ENSMUST00000190055 1176 ntBASIC4.03□□□□□ -1.76
Sox3P53784 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC4.03□□□□□ -1.76
Sox3P53784 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.03□□□□□ -1.76
Sox3P53784 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Sox3P53784 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC4.03□□□□□ -1.76
Sox3P53784 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Sox3P53784 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC4.03□□□□□ -1.76
Sox3P53784 Gm45072-201ENSMUST00000208673 929 ntBASIC4.03□□□□□ -1.76
Sox3P53784 Gm34779-201ENSMUST00000210036 263 ntBASIC4.03□□□□□ -1.76
Sox3P53784 Gm7786-201ENSMUST00000210494 436 ntBASIC4.03□□□□□ -1.76
Sox3P53784 Gm45710-201ENSMUST00000212847 215 ntBASIC4.03□□□□□ -1.76
Sox3P53784 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Sox3P53784 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC4.03□□□□□ -1.76
Sox3P53784 Gm19181-201ENSMUST00000218891 940 ntBASIC4.03□□□□□ -1.76
Sox3P53784 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC4.03□□□□□ -1.76
Sox3P53784 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC4.03□□□□□ -1.76
Sox3P53784 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC4.03□□□□□ -1.76
Sox3P53784 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.03□□□□□ -1.76
Sox3P53784 AC156803.1-201ENSMUST00000224407 820 ntBASIC4.03□□□□□ -1.76
Sox3P53784 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.03□□□□□ -1.76
Sox3P53784 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Sox3P53784 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Sox3P53784 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Sox3P53784 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC4.03□□□□□ -1.76
Sox3P53784 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Sox3P53784 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Sox3P53784 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Sox3P53784 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Sox3P53784 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Sox3P53784 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC4.03□□□□□ -1.76
Sox3P53784 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC4.03□□□□□ -1.76
Sox3P53784 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Sox3P53784 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.03□□□□□ -1.76
Sox3P53784 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.03□□□□□ -1.76
Sox3P53784 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.03□□□□□ -1.77
Sox3P53784 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Sox3P53784 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Sox3P53784 Gm15394-201ENSMUST00000119656 1308 ntBASIC4.02□□□□□ -1.77
Sox3P53784 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Sox3P53784 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.02□□□□□ -1.77
Sox3P53784 AC124446.1-201ENSMUST00000221027 2644 ntBASIC4.02□□□□□ -1.77
Sox3P53784 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Sox3P53784 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC4.02□□□□□ -1.77
Sox3P53784 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Sox3P53784 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Sox3P53784 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.02□□□□□ -1.77
Sox3P53784 Gm24608-201ENSMUST00000104381 136 ntBASIC4.02□□□□□ -1.77
Sox3P53784 Gm24376-201ENSMUST00000104399 127 ntBASIC4.02□□□□□ -1.77
Sox3P53784 Gm22497-201ENSMUST00000104499 131 ntBASIC4.02□□□□□ -1.77
Sox3P53784 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Sox3P53784 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Sox3P53784 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Sox3P53784 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC4.02□□□□□ -1.77
Sox3P53784 Gm14586-201ENSMUST00000119571 408 ntBASIC4.02□□□□□ -1.77
Sox3P53784 Gm12105-201ENSMUST00000120846 779 ntBASIC4.02□□□□□ -1.77
Sox3P53784 Gm22453-201ENSMUST00000122801 318 ntBASIC4.02□□□□□ -1.77
Sox3P53784 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC4.02□□□□□ -1.77
Sox3P53784 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Sox3P53784 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms