Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm45439-201ENSMUST00000211723 359 ntBASIC5.81□□□□□ -1.48
Sox1P53783 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC5.81□□□□□ -1.48
Sox1P53783 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC5.81□□□□□ -1.48
Sox1P53783 AC109180.1-201ENSMUST00000218676 398 ntBASIC5.81□□□□□ -1.48
Sox1P53783 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sox1P53783 CT025689.4-201ENSMUST00000225926 601 ntBASIC5.81□□□□□ -1.48
Sox1P53783 AC154738.4-201ENSMUST00000228310 414 ntBASIC5.81□□□□□ -1.48
Sox1P53783 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Sox1P53783 Gm24037-201ENSMUST00000082871 180 ntBASIC5.81□□□□□ -1.48
Sox1P53783 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sox1P53783 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sox1P53783 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sox1P53783 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Sox1P53783 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sox1P53783 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Sox1P53783 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Sox1P53783 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sox1P53783 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Sox1P53783 Gm43164-201ENSMUST00000202529 2128 ntBASIC5.81□□□□□ -1.48
Sox1P53783 Gm37342-201ENSMUST00000194588 4965 ntBASIC5.81□□□□□ -1.48
Sox1P53783 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sox1P53783 Gm37205-201ENSMUST00000194820 2736 ntBASIC5.81□□□□□ -1.48
Sox1P53783 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sox1P53783 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC5.81□□□□□ -1.48
Sox1P53783 Gm44209-201ENSMUST00000204556 4153 ntBASIC5.81□□□□□ -1.48
Sox1P53783 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sox1P53783 Gm44039-201ENSMUST00000204192 2246 ntBASIC5.8□□□□□ -1.48
Sox1P53783 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC5.8□□□□□ -1.48
Sox1P53783 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sox1P53783 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox1P53783 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC5.8□□□□□ -1.48
Sox1P53783 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Sox1P53783 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Sox1P53783 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox1P53783 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Sox1P53783 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox1P53783 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox1P53783 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox1P53783 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Sox1P53783 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC5.8□□□□□ -1.48
Sox1P53783 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Sox1P53783 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox1P53783 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox1P53783 Gm42923-201ENSMUST00000198438 2896 ntBASIC5.8□□□□□ -1.48
Sox1P53783 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Sox1P53783 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sox1P53783 Gm45061-201ENSMUST00000204395 2095 ntBASIC5.8□□□□□ -1.48
Sox1P53783 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Sox1P53783 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox1P53783 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Sox1P53783 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox1P53783 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sox1P53783 Gm23553-201ENSMUST00000157817 295 ntBASIC5.8□□□□□ -1.48
Sox1P53783 Gm25334-201ENSMUST00000158036 110 ntBASIC5.8□□□□□ -1.48
Sox1P53783 Gm23473-201ENSMUST00000158883 116 ntBASIC5.8□□□□□ -1.48
Sox1P53783 Gm3030-201ENSMUST00000163410 516 ntBASIC5.8□□□□□ -1.48
Sox1P53783 Gm17538-201ENSMUST00000168236 327 ntBASIC5.8□□□□□ -1.48
Sox1P53783 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Sox1P53783 Gm24103-201ENSMUST00000174930 77 ntBASIC5.8□□□□□ -1.48
Sox1P53783 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
Sox1P53783 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Sox1P53783 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Sox1P53783 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Sox1P53783 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Sox1P53783 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Sox1P53783 Gm2092-201ENSMUST00000178887 639 ntBASIC5.8□□□□□ -1.48
Sox1P53783 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Sox1P53783 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sox1P53783 Gm2759-201ENSMUST00000179938 639 ntBASIC5.8□□□□□ -1.48
Sox1P53783 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox1P53783 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sox1P53783 Gm29134-201ENSMUST00000186579 126 ntBASIC5.8□□□□□ -1.48
Sox1P53783 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sox1P53783 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sox1P53783 Gm5734-201ENSMUST00000189787 913 ntBASIC5.8□□□□□ -1.48
Sox1P53783 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sox1P53783 Gm28241-201ENSMUST00000190916 235 ntBASIC5.8□□□□□ -1.48
Sox1P53783 Gm29038-201ENSMUST00000191543 678 ntBASIC5.8□□□□□ -1.48
Sox1P53783 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sox1P53783 Gm43717-201ENSMUST00000198684 310 ntBASIC5.8□□□□□ -1.48
Sox1P53783 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC5.8□□□□□ -1.48
Sox1P53783 Gm45215-201ENSMUST00000206407 395 ntBASIC5.8□□□□□ -1.48
Sox1P53783 Gm45590-201ENSMUST00000209715 262 ntBASIC5.8□□□□□ -1.48
Sox1P53783 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC5.8□□□□□ -1.48
Sox1P53783 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC5.8□□□□□ -1.48
Sox1P53783 AC125543.1-201ENSMUST00000222778 101 ntBASIC5.8□□□□□ -1.48
Sox1P53783 AC154840.1-201ENSMUST00000225216 408 ntBASIC5.8□□□□□ -1.48
Sox1P53783 AL606513.1-201ENSMUST00000225369 579 ntBASIC5.8□□□□□ -1.48
Sox1P53783 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sox1P53783 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox1P53783 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox1P53783 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC5.8□□□□□ -1.48
Sox1P53783 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sox1P53783 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC5.8□□□□□ -1.48
Sox1P53783 AC110043.1-201ENSMUST00000220278 1627 ntBASIC5.8□□□□□ -1.48
Sox1P53783 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox1P53783 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Sox1P53783 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sox1P53783 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Sox1P53783 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms