Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Cux1P53564 Gm24831-201ENSMUST00000116778 126 ntBASIC5.83□□□□□ -1.48
Cux1P53564 Gm11623-201ENSMUST00000120176 1225 ntBASIC5.83□□□□□ -1.48
Cux1P53564 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cux1P53564 Gm37560-201ENSMUST00000194289 1000 ntBASIC5.83□□□□□ -1.48
Cux1P53564 Gm42728-201ENSMUST00000202644 1552 ntBASIC5.83□□□□□ -1.48
Cux1P53564 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC5.83□□□□□ -1.48
Cux1P53564 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC5.83□□□□□ -1.48
Cux1P53564 AC166369.1-201ENSMUST00000228126 351 ntBASIC5.83□□□□□ -1.48
Cux1P53564 Gm25800-201ENSMUST00000082636 134 ntBASIC5.83□□□□□ -1.48
Cux1P53564 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Cux1P53564 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Cux1P53564 AC124586.1-201ENSMUST00000221673 2795 ntBASIC5.82□□□□□ -1.48
Cux1P53564 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cux1P53564 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cux1P53564 Gm14050-201ENSMUST00000117052 346 ntBASIC5.82□□□□□ -1.48
Cux1P53564 Gm16005-201ENSMUST00000120515 269 ntBASIC5.82□□□□□ -1.48
Cux1P53564 Gm14776-201ENSMUST00000121029 887 ntBASIC5.82□□□□□ -1.48
Cux1P53564 Gm12276-201ENSMUST00000121709 301 ntBASIC5.82□□□□□ -1.48
Cux1P53564 Gm16303-201ENSMUST00000161498 390 ntBASIC5.82□□□□□ -1.48
Cux1P53564 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cux1P53564 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC5.82□□□□□ -1.48
Cux1P53564 Mir6938-201ENSMUST00000184173 63 ntBASIC5.82□□□□□ -1.48
Cux1P53564 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Cux1P53564 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC5.82□□□□□ -1.48
Cux1P53564 Gm38234-201ENSMUST00000195204 421 ntBASIC5.82□□□□□ -1.48
Cux1P53564 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC5.82□□□□□ -1.48
Cux1P53564 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Cux1P53564 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC5.82□□□□□ -1.48
Cux1P53564 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Cux1P53564 Gm44542-201ENSMUST00000208677 4314 ntBASIC5.81□□□□□ -1.48
Cux1P53564 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cux1P53564 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Cux1P53564 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Cux1P53564 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Cux1P53564 Gm9911-201ENSMUST00000211467 2802 ntBASIC5.81□□□□□ -1.48
Cux1P53564 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cux1P53564 Gm28591-201ENSMUST00000185259 183 ntBASIC5.81□□□□□ -1.48
Cux1P53564 Trbv8-201ENSMUST00000194020 285 ntBASIC5.81□□□□□ -1.48
Cux1P53564 Gm2189-201ENSMUST00000201419 429 ntBASIC5.81□□□□□ -1.48
Cux1P53564 Gm44773-201ENSMUST00000207374 557 ntBASIC5.81□□□□□ -1.48
Cux1P53564 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC5.81□□□□□ -1.48
Cux1P53564 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC5.81□□□□□ -1.48
Cux1P53564 Gm38126-201ENSMUST00000195297 4003 ntBASIC5.81□□□□□ -1.48
Cux1P53564 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Cux1P53564 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC5.81□□□□□ -1.48
Cux1P53564 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Cux1P53564 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cux1P53564 Gm18594-201ENSMUST00000175733 1403 ntBASIC5.8□□□□□ -1.48
Cux1P53564 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Cux1P53564 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Cux1P53564 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Cux1P53564 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Cux1P53564 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC5.8□□□□□ -1.48
Cux1P53564 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC5.8□□□□□ -1.48
Cux1P53564 Gm24520-201ENSMUST00000179510 110 ntBASIC5.8□□□□□ -1.48
Cux1P53564 Gm7946-201ENSMUST00000203326 958 ntBASIC5.8□□□□□ -1.48
Cux1P53564 Gm8785-201ENSMUST00000220259 487 ntBASIC5.8□□□□□ -1.48
Cux1P53564 Gm3086-202ENSMUST00000221248 310 ntBASIC5.8□□□□□ -1.48
Cux1P53564 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC5.8□□□□□ -1.48
Cux1P53564 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Cux1P53564 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC5.8□□□□□ -1.48
Cux1P53564 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Cux1P53564 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cux1P53564 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.8□□□□□ -1.48
Cux1P53564 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cux1P53564 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Cux1P53564 Gm11325-201ENSMUST00000119967 469 ntBASIC5.79□□□□□ -1.48
Cux1P53564 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC5.79□□□□□ -1.48
Cux1P53564 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Cux1P53564 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC5.79□□□□□ -1.48
Cux1P53564 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Cux1P53564 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Cux1P53564 AC149294.7-201ENSMUST00000227475 1432 ntBASIC5.79□□□□□ -1.48
Cux1P53564 Gm37862-201ENSMUST00000193079 2533 ntBASIC5.79□□□□□ -1.48
Cux1P53564 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Cux1P53564 Gm11913-201ENSMUST00000119094 336 ntBASIC5.79□□□□□ -1.48
Cux1P53564 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Cux1P53564 Gm42832-201ENSMUST00000196361 745 ntBASIC5.79□□□□□ -1.48
Cux1P53564 Gm45327-201ENSMUST00000211612 565 ntBASIC5.79□□□□□ -1.48
Cux1P53564 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Cux1P53564 AC151730.2-201ENSMUST00000224027 475 ntBASIC5.79□□□□□ -1.48
Cux1P53564 Snord15a-201ENSMUST00000083888 148 ntBASIC5.79□□□□□ -1.48
Cux1P53564 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC5.78□□□□□ -1.48
Cux1P53564 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cux1P53564 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Cux1P53564 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC5.78□□□□□ -1.48
Cux1P53564 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Cux1P53564 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Cux1P53564 Mir676-201ENSMUST00000102443 89 ntBASIC5.78□□□□□ -1.48
Cux1P53564 Gm27592-201ENSMUST00000157729 126 ntBASIC5.78□□□□□ -1.48
Cux1P53564 Gm22174-201ENSMUST00000175050 125 ntBASIC5.78□□□□□ -1.48
Cux1P53564 Gm22692-201ENSMUST00000175055 125 ntBASIC5.78□□□□□ -1.48
Cux1P53564 Gm27634-201ENSMUST00000175060 126 ntBASIC5.78□□□□□ -1.48
Cux1P53564 Gm26460-201ENSMUST00000175061 126 ntBASIC5.78□□□□□ -1.48
Cux1P53564 Gm22460-201ENSMUST00000175269 124 ntBASIC5.78□□□□□ -1.48
Cux1P53564 Gm25535-201ENSMUST00000175364 125 ntBASIC5.78□□□□□ -1.48
Cux1P53564 Gm24365-201ENSMUST00000175384 125 ntBASIC5.78□□□□□ -1.48
Cux1P53564 Gm44310-201ENSMUST00000175424 126 ntBASIC5.78□□□□□ -1.48
Cux1P53564 Gm22639-201ENSMUST00000175591 125 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms