Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col18a1P39061 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col18a1P39061 AC137871.4-201ENSMUST00000226323 3901 ntBASIC6.26□□□□□ -1.41
Col18a1P39061 Gm25111-201ENSMUST00000116686 147 ntBASIC6.26□□□□□ -1.41
Col18a1P39061 Gm11386-201ENSMUST00000117761 347 ntBASIC6.26□□□□□ -1.41
Col18a1P39061 Gm13162-201ENSMUST00000121481 454 ntBASIC6.26□□□□□ -1.41
Col18a1P39061 Gm10087-201ENSMUST00000167650 330 ntBASIC6.26□□□□□ -1.41
Col18a1P39061 Gm22243-201ENSMUST00000178754 120 ntBASIC6.26□□□□□ -1.41
Col18a1P39061 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col18a1P39061 Gm43814-201ENSMUST00000197851 413 ntBASIC6.26□□□□□ -1.41
Col18a1P39061 Gm18410-201ENSMUST00000207199 577 ntBASIC6.26□□□□□ -1.41
Col18a1P39061 Gm17737-201ENSMUST00000210183 1147 ntBASIC6.26□□□□□ -1.41
Col18a1P39061 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC6.26□□□□□ -1.41
Col18a1P39061 CT573085.1-201ENSMUST00000224279 1197 ntBASIC6.26□□□□□ -1.41
Col18a1P39061 AC165092.2-201ENSMUST00000224681 368 ntBASIC6.26□□□□□ -1.41
Col18a1P39061 Ear-ps9-202ENSMUST00000226796 245 ntBASIC6.26□□□□□ -1.41
Col18a1P39061 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Col18a1P39061 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Col18a1P39061 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Col18a1P39061 Gm22971-201ENSMUST00000083305 97 ntBASIC6.26□□□□□ -1.41
Col18a1P39061 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Col18a1P39061 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.26□□□□□ -1.41
Col18a1P39061 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Col18a1P39061 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col18a1P39061 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Col18a1P39061 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col18a1P39061 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col18a1P39061 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col18a1P39061 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col18a1P39061 Gm37749-201ENSMUST00000193917 1899 ntBASIC6.25□□□□□ -1.41
Col18a1P39061 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col18a1P39061 AC156569.1-201ENSMUST00000222020 3841 ntBASIC6.25□□□□□ -1.41
Col18a1P39061 Gm45222-201ENSMUST00000207029 4307 ntBASIC6.25□□□□□ -1.41
Col18a1P39061 Gm43374-201ENSMUST00000202498 2391 ntBASIC6.25□□□□□ -1.41
Col18a1P39061 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
Col18a1P39061 Mir669g-201ENSMUST00000116809 123 ntBASIC6.25□□□□□ -1.41
Col18a1P39061 Gm15021-201ENSMUST00000117832 742 ntBASIC6.25□□□□□ -1.41
Col18a1P39061 Gm11843-201ENSMUST00000118984 425 ntBASIC6.25□□□□□ -1.41
Col18a1P39061 Gm12041-201ENSMUST00000121606 602 ntBASIC6.25□□□□□ -1.41
Col18a1P39061 Gm22453-201ENSMUST00000122801 318 ntBASIC6.25□□□□□ -1.41
Col18a1P39061 Gm24854-201ENSMUST00000158025 98 ntBASIC6.25□□□□□ -1.41
Col18a1P39061 Gm28654-201ENSMUST00000189801 379 ntBASIC6.25□□□□□ -1.41
Col18a1P39061 Gm36998-201ENSMUST00000193205 704 ntBASIC6.25□□□□□ -1.41
Col18a1P39061 Gm37586-201ENSMUST00000193654 204 ntBASIC6.25□□□□□ -1.41
Col18a1P39061 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC6.25□□□□□ -1.41
Col18a1P39061 Gm17987-201ENSMUST00000206902 603 ntBASIC6.25□□□□□ -1.41
Col18a1P39061 Gm44820-201ENSMUST00000207420 396 ntBASIC6.25□□□□□ -1.41
Col18a1P39061 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC6.25□□□□□ -1.41
Col18a1P39061 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Col18a1P39061 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Col18a1P39061 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Col18a1P39061 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC6.25□□□□□ -1.41
Col18a1P39061 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC6.25□□□□□ -1.41
Col18a1P39061 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Col18a1P39061 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col18a1P39061 AC121997.2-201ENSMUST00000228095 2294 ntBASIC6.25□□□□□ -1.41
Col18a1P39061 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Col18a1P39061 Gm5155-201ENSMUST00000072381 2841 ntBASIC6.25□□□□□ -1.41
Col18a1P39061 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col18a1P39061 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col18a1P39061 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
Col18a1P39061 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC6.25□□□□□ -1.41
Col18a1P39061 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
Col18a1P39061 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col18a1P39061 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Col18a1P39061 Gm37569-201ENSMUST00000192111 1722 ntBASIC6.24□□□□□ -1.41
Col18a1P39061 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col18a1P39061 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col18a1P39061 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Col18a1P39061 Gm14931-201ENSMUST00000111079 253 ntBASIC6.24□□□□□ -1.41
Col18a1P39061 Gm13803-201ENSMUST00000117547 489 ntBASIC6.24□□□□□ -1.41
Col18a1P39061 Gm12016-201ENSMUST00000119079 681 ntBASIC6.24□□□□□ -1.41
Col18a1P39061 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Col18a1P39061 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC6.24□□□□□ -1.41
Col18a1P39061 Gm5391-201ENSMUST00000121155 613 ntBASIC6.24□□□□□ -1.41
Col18a1P39061 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
Col18a1P39061 Gm22101-201ENSMUST00000157928 103 ntBASIC6.24□□□□□ -1.41
Col18a1P39061 Gm25553-201ENSMUST00000158076 79 ntBASIC6.24□□□□□ -1.41
Col18a1P39061 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Col18a1P39061 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Col18a1P39061 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC6.24□□□□□ -1.41
Col18a1P39061 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col18a1P39061 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC6.24□□□□□ -1.41
Col18a1P39061 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Col18a1P39061 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col18a1P39061 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC6.24□□□□□ -1.41
Col18a1P39061 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Col18a1P39061 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC6.24□□□□□ -1.41
Col18a1P39061 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Col18a1P39061 Gm18388-201ENSMUST00000222339 557 ntBASIC6.24□□□□□ -1.41
Col18a1P39061 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Col18a1P39061 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Col18a1P39061 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col18a1P39061 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
Col18a1P39061 Gm37769-201ENSMUST00000193753 2369 ntBASIC6.24□□□□□ -1.41
Col18a1P39061 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col18a1P39061 Gm44518-201ENSMUST00000208080 4370 ntBASIC6.24□□□□□ -1.41
Col18a1P39061 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col18a1P39061 Gm42702-201ENSMUST00000199515 4217 ntBASIC6.24□□□□□ -1.41
Col18a1P39061 Gm45179-201ENSMUST00000208452 4337 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms