Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Upk2P38575 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC3.31□□□□□ -1.88
Upk2P38575 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Upk2P38575 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Upk2P38575 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Upk2P38575 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Upk2P38575 Gm23271-201ENSMUST00000104052 124 ntBASIC3.31□□□□□ -1.88
Upk2P38575 Gm23273-201ENSMUST00000104058 135 ntBASIC3.31□□□□□ -1.88
Upk2P38575 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Upk2P38575 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Upk2P38575 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC3.31□□□□□ -1.88
Upk2P38575 Gm13755-201ENSMUST00000118509 305 ntBASIC3.31□□□□□ -1.88
Upk2P38575 Gm5943-201ENSMUST00000119458 459 ntBASIC3.31□□□□□ -1.88
Upk2P38575 Gm13788-201ENSMUST00000120767 601 ntBASIC3.31□□□□□ -1.88
Upk2P38575 Gm11982-201ENSMUST00000121480 314 ntBASIC3.31□□□□□ -1.88
Upk2P38575 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC3.31□□□□□ -1.88
Upk2P38575 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Upk2P38575 Gm22084-201ENSMUST00000157585 105 ntBASIC3.31□□□□□ -1.88
Upk2P38575 Gm23123-201ENSMUST00000157648 144 ntBASIC3.31□□□□□ -1.88
Upk2P38575 Gm24727-201ENSMUST00000158231 144 ntBASIC3.31□□□□□ -1.88
Upk2P38575 Gm20693-201ENSMUST00000177431 211 ntBASIC3.31□□□□□ -1.88
Upk2P38575 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Upk2P38575 Gm28471-201ENSMUST00000185994 615 ntBASIC3.31□□□□□ -1.88
Upk2P38575 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.31□□□□□ -1.88
Upk2P38575 Gm43825-201ENSMUST00000199650 734 ntBASIC3.31□□□□□ -1.88
Upk2P38575 Gm43604-201ENSMUST00000199799 705 ntBASIC3.31□□□□□ -1.88
Upk2P38575 Gm42927-201ENSMUST00000200624 3841 ntBASIC3.31□□□□□ -1.88
Upk2P38575 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC3.31□□□□□ -1.88
Upk2P38575 Gm44887-201ENSMUST00000208980 178 ntBASIC3.31□□□□□ -1.88
Upk2P38575 Gm17989-201ENSMUST00000211543 412 ntBASIC3.31□□□□□ -1.88
Upk2P38575 CT025680.1-201ENSMUST00000217375 375 ntBASIC3.31□□□□□ -1.88
Upk2P38575 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.31□□□□□ -1.88
Upk2P38575 Gm46369-201ENSMUST00000221577 401 ntBASIC3.31□□□□□ -1.88
Upk2P38575 AC117202.1-201ENSMUST00000227007 445 ntBASIC3.31□□□□□ -1.88
Upk2P38575 AC080021.1-201ENSMUST00000228104 700 ntBASIC3.31□□□□□ -1.88
Upk2P38575 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Upk2P38575 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC3.31□□□□□ -1.88
Upk2P38575 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Upk2P38575 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Upk2P38575 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Upk2P38575 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Upk2P38575 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Upk2P38575 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Upk2P38575 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Upk2P38575 Gm43508-201ENSMUST00000197251 3783 ntBASIC3.3□□□□□ -1.88
Upk2P38575 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Upk2P38575 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Upk2P38575 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Upk2P38575 Gm25765-201ENSMUST00000104100 132 ntBASIC3.3□□□□□ -1.88
Upk2P38575 Gm13650-201ENSMUST00000117729 433 ntBASIC3.3□□□□□ -1.88
Upk2P38575 Gm9308-201ENSMUST00000119073 448 ntBASIC3.3□□□□□ -1.88
Upk2P38575 Gm2182-201ENSMUST00000145243 663 ntBASIC3.3□□□□□ -1.88
Upk2P38575 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Upk2P38575 Gm22120-201ENSMUST00000175590 70 ntBASIC3.3□□□□□ -1.88
Upk2P38575 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Upk2P38575 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Upk2P38575 Mir3473f-201ENSMUST00000183743 136 ntBASIC3.3□□□□□ -1.88
Upk2P38575 Gm27160-201ENSMUST00000184837 199 ntBASIC3.3□□□□□ -1.88
Upk2P38575 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.3□□□□□ -1.88
Upk2P38575 Gm8600-201ENSMUST00000186320 905 ntBASIC3.3□□□□□ -1.88
Upk2P38575 Gm29610-201ENSMUST00000187749 453 ntBASIC3.3□□□□□ -1.88
Upk2P38575 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Upk2P38575 Gm42814-201ENSMUST00000199370 460 ntBASIC3.3□□□□□ -1.88
Upk2P38575 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC3.3□□□□□ -1.88
Upk2P38575 AC158523.2-201ENSMUST00000222708 548 ntBASIC3.3□□□□□ -1.88
Upk2P38575 AC137961.1-201ENSMUST00000227924 734 ntBASIC3.3□□□□□ -1.88
Upk2P38575 Gm24950-201ENSMUST00000082768 191 ntBASIC3.3□□□□□ -1.88
Upk2P38575 Gm24207-201ENSMUST00000082781 108 ntBASIC3.3□□□□□ -1.88
Upk2P38575 Gm23971-201ENSMUST00000083317 191 ntBASIC3.3□□□□□ -1.88
Upk2P38575 Gm26165-201ENSMUST00000083791 138 ntBASIC3.3□□□□□ -1.88
Upk2P38575 Gm23849-201ENSMUST00000083833 191 ntBASIC3.3□□□□□ -1.88
Upk2P38575 Gm26316-201ENSMUST00000083886 191 ntBASIC3.3□□□□□ -1.88
Upk2P38575 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.3□□□□□ -1.88
Upk2P38575 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Upk2P38575 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Upk2P38575 AC135119.1-201ENSMUST00000227935 3717 ntBASIC3.3□□□□□ -1.88
Upk2P38575 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
Upk2P38575 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Upk2P38575 Gm37006-201ENSMUST00000195253 2674 ntBASIC3.29□□□□□ -1.88
Upk2P38575 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Upk2P38575 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Upk2P38575 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Upk2P38575 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Upk2P38575 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Upk2P38575 Gm22493-201ENSMUST00000104494 132 ntBASIC3.29□□□□□ -1.88
Upk2P38575 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC3.29□□□□□ -1.88
Upk2P38575 Gm14753-201ENSMUST00000118503 246 ntBASIC3.29□□□□□ -1.88
Upk2P38575 Gm12873-201ENSMUST00000119988 422 ntBASIC3.29□□□□□ -1.88
Upk2P38575 Gm11510-201ENSMUST00000120278 347 ntBASIC3.29□□□□□ -1.88
Upk2P38575 Gm25106-201ENSMUST00000122672 134 ntBASIC3.29□□□□□ -1.88
Upk2P38575 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC3.29□□□□□ -1.88
Upk2P38575 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
Upk2P38575 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Upk2P38575 Gm23365-201ENSMUST00000175019 125 ntBASIC3.29□□□□□ -1.88
Upk2P38575 Gm25960-201ENSMUST00000175110 125 ntBASIC3.29□□□□□ -1.88
Upk2P38575 Gm44453-201ENSMUST00000175161 126 ntBASIC3.29□□□□□ -1.88
Upk2P38575 Gm25195-201ENSMUST00000177656 126 ntBASIC3.29□□□□□ -1.88
Upk2P38575 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.29□□□□□ -1.88
Upk2P38575 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
Upk2P38575 Gm9320-201ENSMUST00000184151 473 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms