Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC6.11□□□□□ -1.43
Pde6bP23440 Gm4234-201ENSMUST00000119747 714 ntBASIC6.11□□□□□ -1.43
Pde6bP23440 Gm14534-201ENSMUST00000120045 357 ntBASIC6.11□□□□□ -1.43
Pde6bP23440 Gm6305-201ENSMUST00000121027 1012 ntBASIC6.11□□□□□ -1.43
Pde6bP23440 Gm13220-201ENSMUST00000121535 508 ntBASIC6.11□□□□□ -1.43
Pde6bP23440 Gm12924-201ENSMUST00000121747 318 ntBASIC6.11□□□□□ -1.43
Pde6bP23440 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Pde6bP23440 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC6.11□□□□□ -1.43
Pde6bP23440 Gm24103-201ENSMUST00000174930 77 ntBASIC6.11□□□□□ -1.43
Pde6bP23440 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC6.11□□□□□ -1.43
Pde6bP23440 Gm25873-201ENSMUST00000180317 107 ntBASIC6.11□□□□□ -1.43
Pde6bP23440 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
Pde6bP23440 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC6.11□□□□□ -1.43
Pde6bP23440 Gm37164-201ENSMUST00000192809 637 ntBASIC6.11□□□□□ -1.43
Pde6bP23440 Gm18036-201ENSMUST00000195256 272 ntBASIC6.11□□□□□ -1.43
Pde6bP23440 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Pde6bP23440 Gm43070-201ENSMUST00000196938 415 ntBASIC6.11□□□□□ -1.43
Pde6bP23440 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC6.11□□□□□ -1.43
Pde6bP23440 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC6.11□□□□□ -1.43
Pde6bP23440 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC6.11□□□□□ -1.43
Pde6bP23440 Gm44295-201ENSMUST00000203805 437 ntBASIC6.11□□□□□ -1.43
Pde6bP23440 Gm45082-201ENSMUST00000206082 601 ntBASIC6.11□□□□□ -1.43
Pde6bP23440 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC6.11□□□□□ -1.43
Pde6bP23440 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC6.11□□□□□ -1.43
Pde6bP23440 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Pde6bP23440 AV026068-231ENSMUST00000225862 482 ntBASIC6.11□□□□□ -1.43
Pde6bP23440 Clec2j-201ENSMUST00000032517 515 ntBASIC6.11□□□□□ -1.43
Pde6bP23440 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Pde6bP23440 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Pde6bP23440 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Pde6bP23440 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pde6bP23440 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pde6bP23440 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Pde6bP23440 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Pde6bP23440 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pde6bP23440 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pde6bP23440 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Pde6bP23440 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pde6bP23440 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC6.11□□□□□ -1.43
Pde6bP23440 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pde6bP23440 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Pde6bP23440 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Pde6bP23440 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Pde6bP23440 Gm37250-201ENSMUST00000194919 2388 ntBASIC6.1□□□□□ -1.43
Pde6bP23440 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Pde6bP23440 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Pde6bP23440 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Pde6bP23440 AC158779.2-201ENSMUST00000227902 1947 ntBASIC6.1□□□□□ -1.43
Pde6bP23440 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Pde6bP23440 Gm14871-201ENSMUST00000119056 194 ntBASIC6.1□□□□□ -1.43
Pde6bP23440 Gm15034-201ENSMUST00000120043 349 ntBASIC6.1□□□□□ -1.43
Pde6bP23440 Gm14998-201ENSMUST00000120502 495 ntBASIC6.1□□□□□ -1.43
Pde6bP23440 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC6.1□□□□□ -1.43
Pde6bP23440 Gm24550-201ENSMUST00000158648 279 ntBASIC6.1□□□□□ -1.43
Pde6bP23440 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC6.1□□□□□ -1.43
Pde6bP23440 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC6.1□□□□□ -1.43
Pde6bP23440 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Pde6bP23440 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Pde6bP23440 Gm27796-201ENSMUST00000183863 261 ntBASIC6.1□□□□□ -1.43
Pde6bP23440 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC6.1□□□□□ -1.43
Pde6bP23440 Scgb2b6-201ENSMUST00000188132 330 ntBASIC6.1□□□□□ -1.43
Pde6bP23440 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC6.1□□□□□ -1.43
Pde6bP23440 Gm2053-201ENSMUST00000195671 631 ntBASIC6.1□□□□□ -1.43
Pde6bP23440 Gm43078-201ENSMUST00000197222 168 ntBASIC6.1□□□□□ -1.43
Pde6bP23440 Gm6719-201ENSMUST00000202067 335 ntBASIC6.1□□□□□ -1.43
Pde6bP23440 Gm44818-201ENSMUST00000206608 358 ntBASIC6.1□□□□□ -1.43
Pde6bP23440 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC6.1□□□□□ -1.43
Pde6bP23440 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC6.1□□□□□ -1.43
Pde6bP23440 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC6.1□□□□□ -1.43
Pde6bP23440 AC154738.7-201ENSMUST00000228606 579 ntBASIC6.1□□□□□ -1.43
Pde6bP23440 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Pde6bP23440 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Pde6bP23440 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Pde6bP23440 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Pde6bP23440 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC6.1□□□□□ -1.43
Pde6bP23440 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Pde6bP23440 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Pde6bP23440 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Pde6bP23440 AC154627.2-201ENSMUST00000227028 4669 ntBASIC6.1□□□□□ -1.43
Pde6bP23440 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC6.1□□□□□ -1.43
Pde6bP23440 AC115289.2-201ENSMUST00000223836 2803 ntBASIC6.1□□□□□ -1.43
Pde6bP23440 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Pde6bP23440 AC131586.2-202ENSMUST00000227016 2705 ntBASIC6.1□□□□□ -1.43
Pde6bP23440 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Pde6bP23440 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
Pde6bP23440 AC123705.3-201ENSMUST00000223531 2069 ntBASIC6.1□□□□□ -1.43
Pde6bP23440 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC6.09□□□□□ -1.43
Pde6bP23440 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Pde6bP23440 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Pde6bP23440 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Pde6bP23440 Gm38388-201ENSMUST00000195569 1430 ntBASIC6.09□□□□□ -1.43
Pde6bP23440 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Pde6bP23440 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Pde6bP23440 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Pde6bP23440 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Pde6bP23440 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC6.09□□□□□ -1.43
Pde6bP23440 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Pde6bP23440 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Pde6bP23440 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Pde6bP23440 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms