Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm9432-201ENSMUST00000117810 759 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 Gm15766-201ENSMUST00000118025 813 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 Defa-ps15-201ENSMUST00000118178 477 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Sdc1P18828 Gm15377-201ENSMUST00000119594 246 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 Gm12237-201ENSMUST00000120158 470 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 Gm12105-201ENSMUST00000120846 779 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 Gm9003-201ENSMUST00000121810 482 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 Gm15171-201ENSMUST00000122191 334 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 Gm5401-201ENSMUST00000122444 365 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 Gm25103-201ENSMUST00000122671 318 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 Gm24383-201ENSMUST00000122691 333 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 Gm25293-201ENSMUST00000122792 285 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 Gm12854-201ENSMUST00000128518 297 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC3.4□□□□□ -1.87
Sdc1P18828 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC3.4□□□□□ -1.87
Sdc1P18828 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
Sdc1P18828 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Sdc1P18828 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Sdc1P18828 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Sdc1P18828 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Sdc1P18828 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Sdc1P18828 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Sdc1P18828 Gm22243-201ENSMUST00000178754 120 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 Gm2092-201ENSMUST00000178887 639 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Sdc1P18828 Gm25598-201ENSMUST00000179031 107 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 Gm2759-201ENSMUST00000179938 639 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 Gm27602-201ENSMUST00000183861 111 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 Gm27409-201ENSMUST00000184727 80 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC3.4□□□□□ -1.87
Sdc1P18828 Gm29634-201ENSMUST00000188467 696 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 Gm28699-201ENSMUST00000189193 696 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC3.4□□□□□ -1.87
Sdc1P18828 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.4□□□□□ -1.87
Sdc1P18828 Gm42619-201ENSMUST00000197564 1136 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC3.4□□□□□ -1.87
Sdc1P18828 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Sdc1P18828 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC3.4□□□□□ -1.87
Sdc1P18828 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC3.4□□□□□ -1.87
Sdc1P18828 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Sdc1P18828 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 Gm3816-201ENSMUST00000209803 433 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 Gm45523-201ENSMUST00000210712 799 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 AC161520.1-201ENSMUST00000210954 939 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Sdc1P18828 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Sdc1P18828 Gm18789-201ENSMUST00000216115 550 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC3.4□□□□□ -1.87
Sdc1P18828 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC3.4□□□□□ -1.87
Sdc1P18828 AC164164.2-201ENSMUST00000221809 785 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 AC154724.1-201ENSMUST00000225782 821 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 AC154467.1-201ENSMUST00000227527 449 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 AC123665.6-201ENSMUST00000228568 538 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Sdc1P18828 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Sdc1P18828 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Sdc1P18828 Gm7665-201ENSMUST00000076710 297 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 Gm23459-201ENSMUST00000083259 131 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 Gm25581-201ENSMUST00000083410 164 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 Mir331-201ENSMUST00000083673 96 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 Gm22444-201ENSMUST00000093693 108 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Sdc1P18828 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Sdc1P18828 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Sdc1P18828 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
Sdc1P18828 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
Sdc1P18828 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Sdc1P18828 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Sdc1P18828 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Sdc1P18828 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC3.39□□□□□ -1.87
Sdc1P18828 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Sdc1P18828 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Sdc1P18828 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Sdc1P18828 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Sdc1P18828 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Sdc1P18828 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC3.39□□□□□ -1.87
Sdc1P18828 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Sdc1P18828 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.39□□□□□ -1.87
Sdc1P18828 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Sdc1P18828 Gm25537-201ENSMUST00000103851 109 ntBASIC3.39□□□□□ -1.87
Sdc1P18828 Gm24544-201ENSMUST00000103862 110 ntBASIC3.39□□□□□ -1.87
Sdc1P18828 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Sdc1P18828 Gm12982-201ENSMUST00000117408 190 ntBASIC3.39□□□□□ -1.87
Sdc1P18828 Gm14890-201ENSMUST00000117660 676 ntBASIC3.39□□□□□ -1.87
Sdc1P18828 Gm13155-201ENSMUST00000119277 646 ntBASIC3.39□□□□□ -1.87
Sdc1P18828 Gm13245-201ENSMUST00000119646 260 ntBASIC3.39□□□□□ -1.87
Sdc1P18828 Gm8178-201ENSMUST00000121570 646 ntBASIC3.39□□□□□ -1.87
Sdc1P18828 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC3.39□□□□□ -1.87
Sdc1P18828 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC3.39□□□□□ -1.87
Sdc1P18828 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Sdc1P18828 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.39□□□□□ -1.87
Sdc1P18828 Gm3851-201ENSMUST00000168653 318 ntBASIC3.39□□□□□ -1.87
Sdc1P18828 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Sdc1P18828 Gm18415-201ENSMUST00000177464 647 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 146.8 ms