Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
RaraP11416 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
RaraP11416 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
RaraP11416 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RaraP11416 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
RaraP11416 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RaraP11416 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
RaraP11416 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC6.04□□□□□ -1.44
RaraP11416 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC6.04□□□□□ -1.44
RaraP11416 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RaraP11416 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
RaraP11416 Gm23739-201ENSMUST00000102295 108 ntBASIC6.04□□□□□ -1.44
RaraP11416 Gm25917-201ENSMUST00000104267 130 ntBASIC6.04□□□□□ -1.44
RaraP11416 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
RaraP11416 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
RaraP11416 Gm22953-201ENSMUST00000116724 101 ntBASIC6.04□□□□□ -1.44
RaraP11416 Gm13475-201ENSMUST00000119290 234 ntBASIC6.04□□□□□ -1.44
RaraP11416 Gm15781-201ENSMUST00000120216 323 ntBASIC6.04□□□□□ -1.44
RaraP11416 Gm12110-201ENSMUST00000121601 579 ntBASIC6.04□□□□□ -1.44
RaraP11416 Gm24836-201ENSMUST00000122609 108 ntBASIC6.04□□□□□ -1.44
RaraP11416 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC6.04□□□□□ -1.44
RaraP11416 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC6.04□□□□□ -1.44
RaraP11416 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC6.04□□□□□ -1.44
RaraP11416 Gm25827-201ENSMUST00000157089 107 ntBASIC6.04□□□□□ -1.44
RaraP11416 Gm25117-201ENSMUST00000157194 144 ntBASIC6.04□□□□□ -1.44
RaraP11416 Gm23579-201ENSMUST00000158528 103 ntBASIC6.04□□□□□ -1.44
RaraP11416 Gm16038-201ENSMUST00000159317 193 ntBASIC6.04□□□□□ -1.44
RaraP11416 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC6.04□□□□□ -1.44
RaraP11416 Gm6486-201ENSMUST00000166202 434 ntBASIC6.04□□□□□ -1.44
RaraP11416 Ear-ps3-201ENSMUST00000168308 445 ntBASIC6.04□□□□□ -1.44
RaraP11416 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RaraP11416 Gm22951-201ENSMUST00000179471 107 ntBASIC6.04□□□□□ -1.44
RaraP11416 Gm21978-201ENSMUST00000179696 377 ntBASIC6.04□□□□□ -1.44
RaraP11416 Gm26988-201ENSMUST00000183296 945 ntBASIC6.04□□□□□ -1.44
RaraP11416 Mir6952-201ENSMUST00000185092 61 ntBASIC6.04□□□□□ -1.44
RaraP11416 Gm28666-201ENSMUST00000186649 274 ntBASIC6.04□□□□□ -1.44
RaraP11416 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC6.04□□□□□ -1.44
RaraP11416 Gm42758-201ENSMUST00000202146 283 ntBASIC6.04□□□□□ -1.44
RaraP11416 Gm17737-201ENSMUST00000210183 1147 ntBASIC6.04□□□□□ -1.44
RaraP11416 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RaraP11416 AC154595.2-201ENSMUST00000225067 310 ntBASIC6.04□□□□□ -1.44
RaraP11416 Gm5830-201ENSMUST00000049117 443 ntBASIC6.04□□□□□ -1.44
RaraP11416 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RaraP11416 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.04□□□□□ -1.44
RaraP11416 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RaraP11416 Gm8675-201ENSMUST00000201408 1856 ntBASIC6.04□□□□□ -1.44
RaraP11416 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
RaraP11416 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RaraP11416 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
RaraP11416 Gm37911-201ENSMUST00000193099 1545 ntBASIC6.04□□□□□ -1.44
RaraP11416 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RaraP11416 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC6.04□□□□□ -1.44
RaraP11416 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RaraP11416 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
RaraP11416 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
RaraP11416 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RaraP11416 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
RaraP11416 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RaraP11416 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RaraP11416 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RaraP11416 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RaraP11416 Gm37212-201ENSMUST00000192582 3650 ntBASIC6.03□□□□□ -1.44
RaraP11416 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
RaraP11416 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
RaraP11416 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
RaraP11416 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RaraP11416 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RaraP11416 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
RaraP11416 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
RaraP11416 Gm5381-201ENSMUST00000117975 1250 ntBASIC6.03□□□□□ -1.44
RaraP11416 Gm14352-201ENSMUST00000119250 449 ntBASIC6.03□□□□□ -1.44
RaraP11416 Gm14815-201ENSMUST00000120060 488 ntBASIC6.03□□□□□ -1.44
RaraP11416 Gm12618-201ENSMUST00000121754 483 ntBASIC6.03□□□□□ -1.44
RaraP11416 Gm7846-201ENSMUST00000145844 274 ntBASIC6.03□□□□□ -1.44
RaraP11416 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC6.03□□□□□ -1.44
RaraP11416 Gm22599-201ENSMUST00000157597 132 ntBASIC6.03□□□□□ -1.44
RaraP11416 Gm23386-201ENSMUST00000158585 144 ntBASIC6.03□□□□□ -1.44
RaraP11416 Gm25348-201ENSMUST00000158961 111 ntBASIC6.03□□□□□ -1.44
RaraP11416 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC6.03□□□□□ -1.44
RaraP11416 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC6.03□□□□□ -1.44
RaraP11416 Gm26177-201ENSMUST00000178683 107 ntBASIC6.03□□□□□ -1.44
RaraP11416 Gm25412-201ENSMUST00000180258 107 ntBASIC6.03□□□□□ -1.44
RaraP11416 Npn2-202ENSMUST00000189275 235 ntBASIC6.03□□□□□ -1.44
RaraP11416 Gm28408-201ENSMUST00000191557 463 ntBASIC6.03□□□□□ -1.44
RaraP11416 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC6.03□□□□□ -1.44
RaraP11416 Gm5660-201ENSMUST00000197453 1149 ntBASIC6.03□□□□□ -1.44
RaraP11416 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC6.03□□□□□ -1.44
RaraP11416 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
RaraP11416 Gm44161-201ENSMUST00000203532 253 ntBASIC6.03□□□□□ -1.44
RaraP11416 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC6.03□□□□□ -1.44
RaraP11416 Gm45185-201ENSMUST00000207556 404 ntBASIC6.03□□□□□ -1.44
RaraP11416 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC6.03□□□□□ -1.44
RaraP11416 Gm45387-201ENSMUST00000209792 632 ntBASIC6.03□□□□□ -1.44
RaraP11416 Gm35262-201ENSMUST00000215133 267 ntBASIC6.03□□□□□ -1.44
RaraP11416 AC160016.1-201ENSMUST00000215589 448 ntBASIC6.03□□□□□ -1.44
RaraP11416 AC119894.1-201ENSMUST00000220399 350 ntBASIC6.03□□□□□ -1.44
RaraP11416 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC6.03□□□□□ -1.44
RaraP11416 AC160958.1-201ENSMUST00000224833 368 ntBASIC6.03□□□□□ -1.44
RaraP11416 CT025157.1-201ENSMUST00000226241 292 ntBASIC6.03□□□□□ -1.44
RaraP11416 AC166369.2-201ENSMUST00000228403 308 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms