Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 BX530055.1-201ENSMUST00000197285 122 ntBASIC4.51□□□□□ -1.69
Lire1P11260 Mir5121-201ENSMUST00000198528 74 ntBASIC4.51□□□□□ -1.69
Lire1P11260 Gm4321-201ENSMUST00000200520 442 ntBASIC4.51□□□□□ -1.69
Lire1P11260 Gm20586-201ENSMUST00000210122 547 ntBASIC4.51□□□□□ -1.69
Lire1P11260 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Lire1P11260 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Lire1P11260 Gm31931-201ENSMUST00000219666 222 ntBASIC4.51□□□□□ -1.69
Lire1P11260 AC158523.2-201ENSMUST00000222708 548 ntBASIC4.51□□□□□ -1.69
Lire1P11260 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.51□□□□□ -1.69
Lire1P11260 AC130547.1-201ENSMUST00000228079 1047 ntBASIC4.51□□□□□ -1.69
Lire1P11260 AC125539.2-201ENSMUST00000228339 753 ntBASIC4.51□□□□□ -1.69
Lire1P11260 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Lire1P11260 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Lire1P11260 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Lire1P11260 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Lire1P11260 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Lire1P11260 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Lire1P11260 AC170999.1-201ENSMUST00000226359 1585 ntBASIC4.51□□□□□ -1.69
Lire1P11260 Gm44822-201ENSMUST00000208559 6389 ntBASIC4.51□□□□□ -1.69
Lire1P11260 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Lire1P11260 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Lire1P11260 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.51□□□□□ -1.69
Lire1P11260 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Lire1P11260 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Lire1P11260 AC122382.2-201ENSMUST00000225128 3602 ntBASIC4.51□□□□□ -1.69
Lire1P11260 Gm7135-202ENSMUST00000191257 1905 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Lire1P11260 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
Lire1P11260 AC132237.1-201ENSMUST00000220950 4475 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
Lire1P11260 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Lire1P11260 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Lire1P11260 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC4.5□□□□□ -1.69
Lire1P11260 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Lire1P11260 Gm22657-201ENSMUST00000104197 132 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm22020-201ENSMUST00000104358 136 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm24608-201ENSMUST00000104381 136 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm22468-201ENSMUST00000116680 120 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm26248-201ENSMUST00000116700 121 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm26137-201ENSMUST00000116701 121 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm26190-201ENSMUST00000116704 121 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm24617-201ENSMUST00000116705 121 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm25778-201ENSMUST00000116713 121 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm25774-201ENSMUST00000116717 121 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm22102-201ENSMUST00000116730 121 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm23177-201ENSMUST00000116784 121 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm24193-201ENSMUST00000116801 121 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm24744-201ENSMUST00000116833 121 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm24427-201ENSMUST00000116896 121 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm22346-201ENSMUST00000116918 121 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm23606-201ENSMUST00000116938 121 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm22029-201ENSMUST00000116940 121 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm26298-201ENSMUST00000116956 121 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm23844-201ENSMUST00000116959 121 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm24484-201ENSMUST00000117009 121 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm25347-201ENSMUST00000117026 121 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm22112-201ENSMUST00000117032 121 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm23837-201ENSMUST00000122656 286 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.5□□□□□ -1.69
Lire1P11260 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Lire1P11260 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC4.5□□□□□ -1.69
Lire1P11260 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC4.5□□□□□ -1.69
Lire1P11260 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC4.5□□□□□ -1.69
Lire1P11260 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC4.5□□□□□ -1.69
Lire1P11260 Gm22991-201ENSMUST00000178126 121 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm25754-201ENSMUST00000178653 121 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm22419-201ENSMUST00000178780 121 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm24802-201ENSMUST00000178897 121 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm25208-201ENSMUST00000178964 121 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm24567-201ENSMUST00000179294 121 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm23943-201ENSMUST00000179712 121 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm25228-201ENSMUST00000180121 121 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm23304-201ENSMUST00000180209 121 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm21070-201ENSMUST00000182425 985 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC4.5□□□□□ -1.69
Lire1P11260 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
Lire1P11260 Gm42459-201ENSMUST00000199679 742 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm42758-201ENSMUST00000202146 283 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC4.5□□□□□ -1.69
Lire1P11260 Gm3816-201ENSMUST00000209803 433 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm9655-201ENSMUST00000211321 1284 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm18924-201ENSMUST00000211929 316 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC4.5□□□□□ -1.69
Lire1P11260 AC121986.1-201ENSMUST00000218588 781 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Lire1P11260 Gm5176-202ENSMUST00000220267 583 ntBASIC4.5□□□□□ -1.69
Lire1P11260 AC157515.1-201ENSMUST00000220953 450 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm17915-201ENSMUST00000222077 548 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Gm19786-201ENSMUST00000222589 580 ntBASIC4.5□□□□□ -1.69
Lire1P11260 AC239878.1-201ENSMUST00000224212 506 ntBASIC4.5□□□□□ -1.69
Lire1P11260 AC154305.3-201ENSMUST00000224661 552 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC4.5□□□□□ -1.69
Lire1P11260 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC4.5□□□□□ -1.69
Lire1P11260 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Lire1P11260 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Lire1P11260 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Lire1P11260 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms