Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC5.03□□□□□ -1.6
Hoxd3P09027 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Hoxd3P09027 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Hoxd3P09027 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Hoxd3P09027 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Hoxd3P09027 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Hoxd3P09027 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Hoxd3P09027 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Hoxd3P09027 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Hoxd3P09027 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Hoxd3P09027 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Hoxd3P09027 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Hoxd3P09027 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Hoxd3P09027 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Hoxd3P09027 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
Hoxd3P09027 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.03□□□□□ -1.6
Hoxd3P09027 Gm37255-201ENSMUST00000193302 3060 ntBASIC5.03□□□□□ -1.6
Hoxd3P09027 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Hoxd3P09027 Gm44677-201ENSMUST00000209151 3739 ntBASIC5.02□□□□□ -1.61
Hoxd3P09027 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Hoxd3P09027 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Hoxd3P09027 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hoxd3P09027 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Hoxd3P09027 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Hoxd3P09027 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hoxd3P09027 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC5.02□□□□□ -1.61
Hoxd3P09027 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Hoxd3P09027 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC5.02□□□□□ -1.61
Hoxd3P09027 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hoxd3P09027 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC5.02□□□□□ -1.61
Hoxd3P09027 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC5.02□□□□□ -1.61
Hoxd3P09027 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC5.02□□□□□ -1.61
Hoxd3P09027 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hoxd3P09027 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC5.02□□□□□ -1.61
Hoxd3P09027 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hoxd3P09027 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Hoxd3P09027 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Hoxd3P09027 Gm24272-201ENSMUST00000102329 98 ntBASIC5.02□□□□□ -1.61
Hoxd3P09027 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC5.02□□□□□ -1.61
Hoxd3P09027 Snord98-201ENSMUST00000116819 65 ntBASIC5.02□□□□□ -1.61
Hoxd3P09027 Gm11923-201ENSMUST00000118135 508 ntBASIC5.02□□□□□ -1.61
Hoxd3P09027 Gm15981-201ENSMUST00000119196 457 ntBASIC5.02□□□□□ -1.61
Hoxd3P09027 Gm13692-201ENSMUST00000120774 371 ntBASIC5.02□□□□□ -1.61
Hoxd3P09027 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Hoxd3P09027 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC5.02□□□□□ -1.61
Hoxd3P09027 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC5.02□□□□□ -1.61
Hoxd3P09027 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC5.02□□□□□ -1.61
Hoxd3P09027 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Hoxd3P09027 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC5.02□□□□□ -1.61
Hoxd3P09027 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Hoxd3P09027 Gm43798-201ENSMUST00000202056 394 ntBASIC5.02□□□□□ -1.61
Hoxd3P09027 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC5.02□□□□□ -1.61
Hoxd3P09027 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.02□□□□□ -1.61
Hoxd3P09027 Gm4587-201ENSMUST00000209135 637 ntBASIC5.02□□□□□ -1.61
Hoxd3P09027 AL450317.1-201ENSMUST00000213941 291 ntBASIC5.02□□□□□ -1.61
Hoxd3P09027 AC129202.3-201ENSMUST00000224413 733 ntBASIC5.02□□□□□ -1.61
Hoxd3P09027 AC122393.2-201ENSMUST00000226404 1093 ntBASIC5.02□□□□□ -1.61
Hoxd3P09027 AC123656.2-201ENSMUST00000226726 227 ntBASIC5.02□□□□□ -1.61
Hoxd3P09027 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC5.02□□□□□ -1.61
Hoxd3P09027 Gm25207-201ENSMUST00000093745 107 ntBASIC5.02□□□□□ -1.61
Hoxd3P09027 AC154406.1-201ENSMUST00000215220 2529 ntBASIC5.02□□□□□ -1.61
Hoxd3P09027 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hoxd3P09027 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hoxd3P09027 Gm12080-201ENSMUST00000119821 1883 ntBASIC5.02□□□□□ -1.61
Hoxd3P09027 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC5.02□□□□□ -1.61
Hoxd3P09027 AC131667.1-201ENSMUST00000214665 2175 ntBASIC5.02□□□□□ -1.61
Hoxd3P09027 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hoxd3P09027 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hoxd3P09027 Gm43736-201ENSMUST00000196377 2281 ntBASIC5.02□□□□□ -1.61
Hoxd3P09027 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hoxd3P09027 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Hoxd3P09027 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.02□□□□□ -1.61
Hoxd3P09027 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Hoxd3P09027 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hoxd3P09027 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Hoxd3P09027 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Hoxd3P09027 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Hoxd3P09027 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Hoxd3P09027 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC5.01□□□□□ -1.61
Hoxd3P09027 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Hoxd3P09027 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Hoxd3P09027 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Hoxd3P09027 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC5.01□□□□□ -1.61
Hoxd3P09027 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Hoxd3P09027 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm14513-201ENSMUST00000117403 123 ntBASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm11462-201ENSMUST00000117749 562 ntBASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm14469-201ENSMUST00000118363 202 ntBASIC5.01□□□□□ -1.61
Hoxd3P09027 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm14591-201ENSMUST00000120407 518 ntBASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm11384-201ENSMUST00000121376 303 ntBASIC5.01□□□□□ -1.61
Hoxd3P09027 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC5.01□□□□□ -1.61
Hoxd3P09027 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm26278-201ENSMUST00000157098 132 ntBASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm22435-201ENSMUST00000158552 128 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms