Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC3.83□□□□□ -1.8
BckdkO55028 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
BckdkO55028 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC3.83□□□□□ -1.8
BckdkO55028 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC3.83□□□□□ -1.8
BckdkO55028 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC3.83□□□□□ -1.8
BckdkO55028 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC3.83□□□□□ -1.8
BckdkO55028 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC3.83□□□□□ -1.8
BckdkO55028 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC3.83□□□□□ -1.8
BckdkO55028 Trbv27-201ENSMUST00000193711 277 ntBASIC3.83□□□□□ -1.8
BckdkO55028 Trbv11-201ENSMUST00000194354 260 ntBASIC3.83□□□□□ -1.8
BckdkO55028 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC3.83□□□□□ -1.8
BckdkO55028 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC3.83□□□□□ -1.8
BckdkO55028 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC3.83□□□□□ -1.8
BckdkO55028 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC3.83□□□□□ -1.8
BckdkO55028 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC3.83□□□□□ -1.8
BckdkO55028 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
BckdkO55028 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
BckdkO55028 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC3.83□□□□□ -1.8
BckdkO55028 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
BckdkO55028 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC3.83□□□□□ -1.8
BckdkO55028 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
BckdkO55028 AC139750.2-201ENSMUST00000224424 386 ntBASIC3.83□□□□□ -1.8
BckdkO55028 AC156790.5-201ENSMUST00000227075 231 ntBASIC3.83□□□□□ -1.8
BckdkO55028 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
BckdkO55028 Gm13058-201ENSMUST00000117097 1435 ntBASIC3.83□□□□□ -1.8
BckdkO55028 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
BckdkO55028 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
BckdkO55028 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
BckdkO55028 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
BckdkO55028 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
BckdkO55028 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
BckdkO55028 Gm42537-201ENSMUST00000198260 2574 ntBASIC3.83□□□□□ -1.8
BckdkO55028 Gm37742-201ENSMUST00000193263 3979 ntBASIC3.83□□□□□ -1.8
BckdkO55028 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
BckdkO55028 AC155921.1-201ENSMUST00000216568 3841 ntBASIC3.82□□□□□ -1.8
BckdkO55028 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
BckdkO55028 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
BckdkO55028 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
BckdkO55028 Gm29325-201ENSMUST00000190705 2528 ntBASIC3.82□□□□□ -1.8
BckdkO55028 Gm37668-201ENSMUST00000193745 1944 ntBASIC3.82□□□□□ -1.8
BckdkO55028 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
BckdkO55028 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
BckdkO55028 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
BckdkO55028 Mir551b-201ENSMUST00000102165 98 ntBASIC3.82□□□□□ -1.8
BckdkO55028 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC3.82□□□□□ -1.8
BckdkO55028 Gm14991-201ENSMUST00000119913 598 ntBASIC3.82□□□□□ -1.8
BckdkO55028 Gm5060-201ENSMUST00000120072 599 ntBASIC3.82□□□□□ -1.8
BckdkO55028 Gm9003-201ENSMUST00000121810 482 ntBASIC3.82□□□□□ -1.8
BckdkO55028 Gm25432-201ENSMUST00000158284 66 ntBASIC3.82□□□□□ -1.8
BckdkO55028 Gm3496-201ENSMUST00000188283 745 ntBASIC3.82□□□□□ -1.8
BckdkO55028 Gm18303-201ENSMUST00000190055 1176 ntBASIC3.82□□□□□ -1.8
BckdkO55028 Gm19280-201ENSMUST00000190191 205 ntBASIC3.82□□□□□ -1.8
BckdkO55028 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
BckdkO55028 Gm36954-201ENSMUST00000195362 363 ntBASIC3.82□□□□□ -1.8
BckdkO55028 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC3.82□□□□□ -1.8
BckdkO55028 Gm4501-201ENSMUST00000207330 551 ntBASIC3.82□□□□□ -1.8
BckdkO55028 Gm4558-201ENSMUST00000207886 521 ntBASIC3.82□□□□□ -1.8
BckdkO55028 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
BckdkO55028 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC3.82□□□□□ -1.8
BckdkO55028 Gm18487-201ENSMUST00000215826 878 ntBASIC3.82□□□□□ -1.8
BckdkO55028 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC3.82□□□□□ -1.8
BckdkO55028 AC131747.1-201ENSMUST00000226159 793 ntBASIC3.82□□□□□ -1.8
BckdkO55028 AC150560.2-201ENSMUST00000227208 171 ntBASIC3.82□□□□□ -1.8
BckdkO55028 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
BckdkO55028 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC3.82□□□□□ -1.8
BckdkO55028 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
BckdkO55028 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
BckdkO55028 Gm6361-201ENSMUST00000091031 435 ntBASIC3.82□□□□□ -1.8
BckdkO55028 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
BckdkO55028 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
BckdkO55028 Gm38212-201ENSMUST00000194081 2756 ntBASIC3.82□□□□□ -1.8
BckdkO55028 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
BckdkO55028 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
BckdkO55028 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
BckdkO55028 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
BckdkO55028 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC3.81□□□□□ -1.8
BckdkO55028 Gm45131-201ENSMUST00000208051 2582 ntBASIC3.81□□□□□ -1.8
BckdkO55028 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
BckdkO55028 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
BckdkO55028 Gm43834-201ENSMUST00000197097 4830 ntBASIC3.81□□□□□ -1.8
BckdkO55028 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
BckdkO55028 Gm11432-201ENSMUST00000117334 231 ntBASIC3.81□□□□□ -1.8
BckdkO55028 Gm12387-201ENSMUST00000118573 955 ntBASIC3.81□□□□□ -1.8
BckdkO55028 Gm11483-201ENSMUST00000119839 247 ntBASIC3.81□□□□□ -1.8
BckdkO55028 Gm14656-201ENSMUST00000120342 502 ntBASIC3.81□□□□□ -1.8
BckdkO55028 Gm11350-201ENSMUST00000121436 870 ntBASIC3.81□□□□□ -1.8
BckdkO55028 Gm12103-201ENSMUST00000121892 362 ntBASIC3.81□□□□□ -1.8
BckdkO55028 Gm8200-201ENSMUST00000122390 222 ntBASIC3.81□□□□□ -1.8
BckdkO55028 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
BckdkO55028 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC3.81□□□□□ -1.8
BckdkO55028 Gm22816-201ENSMUST00000157450 117 ntBASIC3.81□□□□□ -1.8
BckdkO55028 Gm25908-201ENSMUST00000157624 98 ntBASIC3.81□□□□□ -1.8
BckdkO55028 Gm24961-201ENSMUST00000157918 184 ntBASIC3.81□□□□□ -1.8
BckdkO55028 Gm3191-201ENSMUST00000167139 346 ntBASIC3.81□□□□□ -1.8
BckdkO55028 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC3.81□□□□□ -1.8
BckdkO55028 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
BckdkO55028 Gm22646-201ENSMUST00000175130 115 ntBASIC3.81□□□□□ -1.8
BckdkO55028 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC3.81□□□□□ -1.8
BckdkO55028 Gm27695-201ENSMUST00000184301 91 ntBASIC3.81□□□□□ -1.8
BckdkO55028 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms