Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Col6a3E9PWQ3 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Col6a3E9PWQ3 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Col6a3E9PWQ3 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Col6a3E9PWQ3 Gm44250-201ENSMUST00000203092 4229 ntBASIC3.75□□□□□ -1.81
Col6a3E9PWQ3 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Col6a3E9PWQ3 Gm22666-201ENSMUST00000158717 164 ntBASIC3.75□□□□□ -1.81
Col6a3E9PWQ3 Gm29161-201ENSMUST00000188250 699 ntBASIC3.75□□□□□ -1.81
Col6a3E9PWQ3 Gm42896-201ENSMUST00000201249 1113 ntBASIC3.75□□□□□ -1.81
Col6a3E9PWQ3 Mir30e-201ENSMUST00000083475 92 ntBASIC3.75□□□□□ -1.81
Col6a3E9PWQ3 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
Col6a3E9PWQ3 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Col6a3E9PWQ3 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Col6a3E9PWQ3 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC3.75□□□□□ -1.81
Col6a3E9PWQ3 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.75□□□□□ -1.81
Col6a3E9PWQ3 Gm5066-201ENSMUST00000188479 822 ntBASIC3.75□□□□□ -1.81
Col6a3E9PWQ3 Gm29330-201ENSMUST00000190032 699 ntBASIC3.75□□□□□ -1.81
Col6a3E9PWQ3 Gm28098-201ENSMUST00000191361 699 ntBASIC3.75□□□□□ -1.81
Col6a3E9PWQ3 Gm18011-201ENSMUST00000203717 565 ntBASIC3.75□□□□□ -1.81
Col6a3E9PWQ3 Gm45157-201ENSMUST00000208729 401 ntBASIC3.75□□□□□ -1.81
Col6a3E9PWQ3 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
Col6a3E9PWQ3 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Col6a3E9PWQ3 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Col6a3E9PWQ3 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC3.75□□□□□ -1.81
Col6a3E9PWQ3 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Col6a3E9PWQ3 Ctnnd1-221ENSMUST00000111695 6344 ntTSL 5 BASIC3.75□□□□□ -1.81
Col6a3E9PWQ3 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Col6a3E9PWQ3 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Col6a3E9PWQ3 Hba-ps4-201ENSMUST00000128900 447 ntBASIC3.75□□□□□ -1.81
Col6a3E9PWQ3 Gm16378-201ENSMUST00000179168 342 ntBASIC3.75□□□□□ -1.81
Col6a3E9PWQ3 Gm44526-201ENSMUST00000204664 121 ntBASIC3.75□□□□□ -1.81
Col6a3E9PWQ3 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC3.75□□□□□ -1.81
Col6a3E9PWQ3 CT030704.1-201ENSMUST00000227521 699 ntBASIC3.75□□□□□ -1.81
Col6a3E9PWQ3 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC3.75□□□□□ -1.81
Col6a3E9PWQ3 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Col6a3E9PWQ3 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Col6a3E9PWQ3 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Col6a3E9PWQ3 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Col6a3E9PWQ3 Gm37033-201ENSMUST00000193199 7350 ntBASIC3.74□□□□□ -1.81
Col6a3E9PWQ3 Gm38260-201ENSMUST00000193573 3995 ntBASIC3.74□□□□□ -1.81
Col6a3E9PWQ3 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC3.74□□□□□ -1.81
Col6a3E9PWQ3 Gm4759-201ENSMUST00000183414 6622 ntBASIC3.74□□□□□ -1.81
Col6a3E9PWQ3 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
Col6a3E9PWQ3 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
Col6a3E9PWQ3 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.74□□□□□ -1.81
Col6a3E9PWQ3 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Col6a3E9PWQ3 Gm27266-201ENSMUST00000184521 123 ntBASIC3.74□□□□□ -1.81
Col6a3E9PWQ3 Gm43774-201ENSMUST00000196327 878 ntBASIC3.74□□□□□ -1.81
Col6a3E9PWQ3 Gm45327-201ENSMUST00000211612 565 ntBASIC3.74□□□□□ -1.81
Col6a3E9PWQ3 Snord15a-201ENSMUST00000083888 148 ntBASIC3.74□□□□□ -1.81
Col6a3E9PWQ3 Ctnnd1-206ENSMUST00000111675 5089 ntTSL 5 BASIC3.74□□□□□ -1.81
Col6a3E9PWQ3 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.74□□□□□ -1.81
Col6a3E9PWQ3 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
Col6a3E9PWQ3 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC3.74□□□□□ -1.81
Col6a3E9PWQ3 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Col6a3E9PWQ3 Gm19368-201ENSMUST00000221258 4424 ntBASIC3.74□□□□□ -1.81
Col6a3E9PWQ3 AC125487.2-201ENSMUST00000219810 1300 ntBASIC3.74□□□□□ -1.81
Col6a3E9PWQ3 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Col6a3E9PWQ3 Gm13961-201ENSMUST00000119282 4772 ntBASIC3.74□□□□□ -1.81
Col6a3E9PWQ3 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Col6a3E9PWQ3 Gm9427-201ENSMUST00000116187 651 ntBASIC3.74□□□□□ -1.81
Col6a3E9PWQ3 Gm3757-201ENSMUST00000125878 675 ntBASIC3.74□□□□□ -1.81
Col6a3E9PWQ3 Gm24244-201ENSMUST00000157317 130 ntBASIC3.74□□□□□ -1.81
Col6a3E9PWQ3 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
Col6a3E9PWQ3 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Col6a3E9PWQ3 Gm26129-201ENSMUST00000082719 107 ntBASIC3.74□□□□□ -1.81
Col6a3E9PWQ3 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 Gm2343-201ENSMUST00000161177 1042 ntBASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 Gm7870-201ENSMUST00000184467 616 ntBASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 Gm8392-201ENSMUST00000185647 835 ntBASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 Gm43887-201ENSMUST00000204727 3186 ntBASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 Gm15994-201ENSMUST00000118029 402 ntBASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 Gm25203-202ENSMUST00000200458 216 ntBASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 Gm25203-201ENSMUST00000082842 215 ntBASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 Gm15936-201ENSMUST00000118706 460 ntBASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 Gm24402-201ENSMUST00000157873 91 ntBASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC3.73□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms