Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm24318-201ENSMUST00000104490 131 ntBASIC3.21□□□□□ -1.89
Col6a4A2AX52 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
Col6a4A2AX52 Gm22531-201ENSMUST00000158819 140 ntBASIC3.21□□□□□ -1.89
Col6a4A2AX52 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
Col6a4A2AX52 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
Col6a4A2AX52 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.21□□□□□ -1.89
Col6a4A2AX52 Gm42832-201ENSMUST00000196361 745 ntBASIC3.21□□□□□ -1.89
Col6a4A2AX52 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.21□□□□□ -1.89
Col6a4A2AX52 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
Col6a4A2AX52 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.21□□□□□ -1.89
Col6a4A2AX52 AC154467.1-201ENSMUST00000227527 449 ntBASIC3.21□□□□□ -1.89
Col6a4A2AX52 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
Col6a4A2AX52 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Col6a4A2AX52 Gm37802-201ENSMUST00000194998 2643 ntBASIC3.21□□□□□ -1.9
Col6a4A2AX52 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.21□□□□□ -1.9
Col6a4A2AX52 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Col6a4A2AX52 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
Col6a4A2AX52 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Col6a4A2AX52 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Col6a4A2AX52 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.21□□□□□ -1.9
Col6a4A2AX52 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Col6a4A2AX52 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Col6a4A2AX52 AC149294.7-201ENSMUST00000227475 1432 ntBASIC3.21□□□□□ -1.9
Col6a4A2AX52 Gm3089-201ENSMUST00000200804 1395 ntBASIC3.21□□□□□ -1.9
Col6a4A2AX52 Gm3302-201ENSMUST00000201462 1395 ntBASIC3.21□□□□□ -1.9
Col6a4A2AX52 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
Col6a4A2AX52 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC3.21□□□□□ -1.9
Col6a4A2AX52 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Col6a4A2AX52 Gm12087-201ENSMUST00000121878 258 ntBASIC3.21□□□□□ -1.9
Col6a4A2AX52 Gm26020-201ENSMUST00000122729 183 ntBASIC3.21□□□□□ -1.9
Col6a4A2AX52 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.21□□□□□ -1.9
Col6a4A2AX52 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC3.21□□□□□ -1.9
Col6a4A2AX52 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Col6a4A2AX52 Gm43586-201ENSMUST00000195948 310 ntBASIC3.21□□□□□ -1.9
Col6a4A2AX52 Gm43315-201ENSMUST00000198120 313 ntBASIC3.21□□□□□ -1.9
Col6a4A2AX52 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC3.21□□□□□ -1.9
Col6a4A2AX52 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Col6a4A2AX52 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Col6a4A2AX52 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Col6a4A2AX52 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Col6a4A2AX52 Gm37461-201ENSMUST00000193929 3704 ntBASIC3.21□□□□□ -1.9
Col6a4A2AX52 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC3.21□□□□□ -1.9
Col6a4A2AX52 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Col6a4A2AX52 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Col6a4A2AX52 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC3.2□□□□□ -1.9
Col6a4A2AX52 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Col6a4A2AX52 Hm629797-201ENSMUST00000183645 2398 ntBASIC3.2□□□□□ -1.9
Col6a4A2AX52 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.2□□□□□ -1.9
Col6a4A2AX52 Gm15060-201ENSMUST00000119550 948 ntBASIC3.2□□□□□ -1.9
Col6a4A2AX52 Gm23602-201ENSMUST00000157258 132 ntBASIC3.2□□□□□ -1.9
Col6a4A2AX52 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC3.2□□□□□ -1.9
Col6a4A2AX52 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC3.2□□□□□ -1.9
Col6a4A2AX52 Gm28148-201ENSMUST00000186924 697 ntBASIC3.2□□□□□ -1.9
Col6a4A2AX52 Gm21617-201ENSMUST00000188297 691 ntBASIC3.2□□□□□ -1.9
Col6a4A2AX52 Gm9722-201ENSMUST00000194568 802 ntBASIC3.2□□□□□ -1.9
Col6a4A2AX52 Gm45860-201ENSMUST00000212700 334 ntBASIC3.2□□□□□ -1.9
Col6a4A2AX52 AC174776.1-201ENSMUST00000221509 405 ntBASIC3.2□□□□□ -1.9
Col6a4A2AX52 AC174776.2-201ENSMUST00000222561 405 ntBASIC3.2□□□□□ -1.9
Col6a4A2AX52 AC133101.1-201ENSMUST00000226939 1199 ntBASIC3.2□□□□□ -1.9
Col6a4A2AX52 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Col6a4A2AX52 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Col6a4A2AX52 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Col6a4A2AX52 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
Col6a4A2AX52 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Col6a4A2AX52 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Col6a4A2AX52 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC3.2□□□□□ -1.9
Col6a4A2AX52 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Col6a4A2AX52 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Col6a4A2AX52 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC3.2□□□□□ -1.9
Col6a4A2AX52 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Col6a4A2AX52 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.2□□□□□ -1.9
Col6a4A2AX52 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Col6a4A2AX52 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.2□□□□□ -1.9
Col6a4A2AX52 Gm17966-201ENSMUST00000193453 594 ntBASIC3.2□□□□□ -1.9
Col6a4A2AX52 Gm37560-201ENSMUST00000194289 1000 ntBASIC3.2□□□□□ -1.9
Col6a4A2AX52 Gm44393-201ENSMUST00000197418 138 ntBASIC3.2□□□□□ -1.9
Col6a4A2AX52 AC123835.1-201ENSMUST00000214362 670 ntBASIC3.2□□□□□ -1.9
Col6a4A2AX52 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.2□□□□□ -1.9
Col6a4A2AX52 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Col6a4A2AX52 Gm22154-201ENSMUST00000083844 131 ntBASIC3.2□□□□□ -1.9
Col6a4A2AX52 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Col6a4A2AX52 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Col6a4A2AX52 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
Col6a4A2AX52 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Col6a4A2AX52 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Col6a4A2AX52 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Col6a4A2AX52 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Col6a4A2AX52 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.19□□□□□ -1.9
Col6a4A2AX52 Gm24068-201ENSMUST00000104513 132 ntBASIC3.19□□□□□ -1.9
Col6a4A2AX52 Gm14050-201ENSMUST00000117052 346 ntBASIC3.19□□□□□ -1.9
Col6a4A2AX52 Gm14516-201ENSMUST00000120012 252 ntBASIC3.19□□□□□ -1.9
Col6a4A2AX52 Gm16005-201ENSMUST00000120515 269 ntBASIC3.19□□□□□ -1.9
Col6a4A2AX52 Gm15141-201ENSMUST00000121860 729 ntBASIC3.19□□□□□ -1.9
Col6a4A2AX52 Gm24627-201ENSMUST00000122764 138 ntBASIC3.19□□□□□ -1.9
Col6a4A2AX52 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Col6a4A2AX52 Gm26088-201ENSMUST00000157896 131 ntBASIC3.19□□□□□ -1.9
Col6a4A2AX52 Gm25860-201ENSMUST00000158252 126 ntBASIC3.19□□□□□ -1.9
Col6a4A2AX52 Gm25490-201ENSMUST00000158734 130 ntBASIC3.19□□□□□ -1.9
Col6a4A2AX52 Gm28997-201ENSMUST00000188759 429 ntBASIC3.19□□□□□ -1.9
Col6a4A2AX52 Gm43015-201ENSMUST00000199087 565 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms