Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Cldn3Q9Z0G9 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC4.21□□□□□ -1.74
Cldn3Q9Z0G9 Gm28011-201ENSMUST00000184097 175 ntBASIC4.21□□□□□ -1.74
Cldn3Q9Z0G9 Gm29479-201ENSMUST00000190352 455 ntBASIC4.21□□□□□ -1.74
Cldn3Q9Z0G9 Gm35702-201ENSMUST00000198653 511 ntBASIC4.21□□□□□ -1.74
Cldn3Q9Z0G9 Gm42814-201ENSMUST00000199370 460 ntBASIC4.21□□□□□ -1.74
Cldn3Q9Z0G9 Gm19131-201ENSMUST00000203408 789 ntBASIC4.21□□□□□ -1.74
Cldn3Q9Z0G9 Gm18462-201ENSMUST00000208112 417 ntBASIC4.21□□□□□ -1.74
Cldn3Q9Z0G9 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC4.21□□□□□ -1.74
Cldn3Q9Z0G9 Gm19181-201ENSMUST00000218891 940 ntBASIC4.21□□□□□ -1.74
Cldn3Q9Z0G9 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC4.21□□□□□ -1.74
Cldn3Q9Z0G9 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Cldn3Q9Z0G9 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Cldn3Q9Z0G9 Gm10115-201ENSMUST00000076071 1228 ntBASIC4.21□□□□□ -1.74
Cldn3Q9Z0G9 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.21□□□□□ -1.74
Cldn3Q9Z0G9 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Cldn3Q9Z0G9 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Cldn3Q9Z0G9 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Cldn3Q9Z0G9 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Cldn3Q9Z0G9 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Cldn3Q9Z0G9 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Cldn3Q9Z0G9 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Cldn3Q9Z0G9 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Cldn3Q9Z0G9 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Cldn3Q9Z0G9 Gm13100-201ENSMUST00000117157 1439 ntBASIC4.21□□□□□ -1.74
Cldn3Q9Z0G9 Gm43834-201ENSMUST00000197097 4830 ntBASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 Gm3623-201ENSMUST00000173643 2747 ntBASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 Gm37303-201ENSMUST00000194202 1559 ntBASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 Mir193b-201ENSMUST00000103784 79 ntBASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 Snora64-201ENSMUST00000104521 134 ntBASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 Gm13501-201ENSMUST00000118477 979 ntBASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 Gm12190-201ENSMUST00000120001 187 ntBASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 Gm23960-201ENSMUST00000157206 131 ntBASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 Atp2b4-208ENSMUST00000167348 243 ntBASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 Mir7031-201ENSMUST00000183860 65 ntBASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 Mir6391-201ENSMUST00000184391 104 ntBASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 Gm43855-201ENSMUST00000197462 507 ntBASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 Gm19366-201ENSMUST00000206996 156 ntBASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 Gm45474-201ENSMUST00000209471 408 ntBASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 AC159819.1-201ENSMUST00000213911 328 ntBASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 AC156504.1-201ENSMUST00000214608 157 ntBASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 AC153801.1-201ENSMUST00000217904 947 ntBASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 AC140930.4-201ENSMUST00000220750 150 ntBASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 Mir26a-2-201ENSMUST00000083496 84 ntBASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.2□□□□□ -1.74
Cldn3Q9Z0G9 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 Gm7195-201ENSMUST00000190869 1707 ntBASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 Gm23178-201ENSMUST00000116782 95 ntBASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 Gm8475-201ENSMUST00000118211 526 ntBASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 Gm7350-201ENSMUST00000120964 636 ntBASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 Gm13508-201ENSMUST00000121639 775 ntBASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 Gm14122-201ENSMUST00000122076 973 ntBASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 Gm19200-201ENSMUST00000182579 1001 ntBASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 Gm3496-201ENSMUST00000188283 745 ntBASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 Gm29747-201ENSMUST00000194764 585 ntBASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 Ighv8-1-201ENSMUST00000194897 291 ntBASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 Gm36954-201ENSMUST00000195362 363 ntBASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 Gm36985-201ENSMUST00000195595 379 ntBASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 Gm4045-201ENSMUST00000204076 310 ntBASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 Gm43892-201ENSMUST00000204373 265 ntBASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 Gm44665-201ENSMUST00000205381 251 ntBASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 Gm44972-201ENSMUST00000206419 406 ntBASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 Gm19269-201ENSMUST00000211401 804 ntBASIC4.19□□□□□ -1.74
Cldn3Q9Z0G9 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 110.9 ms