Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Snora81-201ENSMUST00000157310 178 ntBASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Gm24898-201ENSMUST00000158133 106 ntBASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Gm20701-201ENSMUST00000176082 347 ntBASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Gm27254-201ENSMUST00000183926 517 ntBASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Gm29492-201ENSMUST00000187124 457 ntBASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Trbv28-201ENSMUST00000192804 264 ntBASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Gm37088-201ENSMUST00000193887 406 ntBASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC4.04□□□□□ -1.76
Trim3Q9R1R2 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Gm22897-201ENSMUST00000197860 128 ntBASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Gm4734-201ENSMUST00000200117 777 ntBASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC4.04□□□□□ -1.76
Trim3Q9R1R2 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Gm45247-201ENSMUST00000210757 309 ntBASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Gm45608-201ENSMUST00000210948 389 ntBASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Trim3Q9R1R2 AC153932.1-201ENSMUST00000218558 787 ntBASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Gm46190-201ENSMUST00000219650 427 ntBASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Gm9616-201ENSMUST00000221154 781 ntBASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Gm46369-201ENSMUST00000221577 401 ntBASIC4.04□□□□□ -1.76
Trim3Q9R1R2 AL606513.1-201ENSMUST00000225369 579 ntBASIC4.04□□□□□ -1.76
Trim3Q9R1R2 AC132112.1-201ENSMUST00000226354 505 ntBASIC4.04□□□□□ -1.76
Trim3Q9R1R2 AC164437.2-201ENSMUST00000228915 797 ntBASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Gm23464-201ENSMUST00000083145 147 ntBASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Gm29325-201ENSMUST00000190705 2528 ntBASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Trim3Q9R1R2 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
Trim3Q9R1R2 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
Trim3Q9R1R2 Gm15385-201ENSMUST00000118725 667 ntBASIC4.03□□□□□ -1.76
Trim3Q9R1R2 Klra14-ps-201ENSMUST00000119532 802 ntBASIC4.03□□□□□ -1.76
Trim3Q9R1R2 Gm6062-201ENSMUST00000120462 631 ntBASIC4.03□□□□□ -1.76
Trim3Q9R1R2 Gm14776-201ENSMUST00000121029 887 ntBASIC4.03□□□□□ -1.76
Trim3Q9R1R2 Gm5392-201ENSMUST00000122189 789 ntBASIC4.03□□□□□ -1.76
Trim3Q9R1R2 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Trim3Q9R1R2 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC4.03□□□□□ -1.76
Trim3Q9R1R2 Gm25264-201ENSMUST00000158519 117 ntBASIC4.03□□□□□ -1.76
Trim3Q9R1R2 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Trim3Q9R1R2 Gm27896-201ENSMUST00000175162 317 ntBASIC4.03□□□□□ -1.76
Trim3Q9R1R2 Gm27414-201ENSMUST00000185033 381 ntBASIC4.03□□□□□ -1.76
Trim3Q9R1R2 Mir6943-201ENSMUST00000185186 66 ntBASIC4.03□□□□□ -1.76
Trim3Q9R1R2 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Trim3Q9R1R2 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Trim3Q9R1R2 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.03□□□□□ -1.76
Trim3Q9R1R2 Gm31532-201ENSMUST00000203555 767 ntBASIC4.03□□□□□ -1.76
Trim3Q9R1R2 Gm44059-201ENSMUST00000204048 351 ntBASIC4.03□□□□□ -1.76
Trim3Q9R1R2 Gm44919-201ENSMUST00000208587 1073 ntBASIC4.03□□□□□ -1.76
Trim3Q9R1R2 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Trim3Q9R1R2 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC4.03□□□□□ -1.76
Trim3Q9R1R2 AC153801.1-201ENSMUST00000217904 947 ntBASIC4.03□□□□□ -1.76
Trim3Q9R1R2 AC126690.1-201ENSMUST00000228898 397 ntBASIC4.03□□□□□ -1.76
Trim3Q9R1R2 Gm6462-201ENSMUST00000081488 304 ntBASIC4.03□□□□□ -1.76
Trim3Q9R1R2 Gm23099-201ENSMUST00000083454 139 ntBASIC4.03□□□□□ -1.76
Trim3Q9R1R2 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Trim3Q9R1R2 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Trim3Q9R1R2 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Trim3Q9R1R2 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
Trim3Q9R1R2 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Trim3Q9R1R2 AC147615.2-201ENSMUST00000219876 2154 ntBASIC4.03□□□□□ -1.76
Trim3Q9R1R2 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
Trim3Q9R1R2 AC120375.2-201ENSMUST00000226532 1853 ntBASIC4.03□□□□□ -1.77
Trim3Q9R1R2 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.03□□□□□ -1.77
Trim3Q9R1R2 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
Trim3Q9R1R2 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trim3Q9R1R2 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Gm42717-201ENSMUST00000197309 3463 ntBASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Gm42876-201ENSMUST00000196989 3215 ntBASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Gm14750-201ENSMUST00000118262 516 ntBASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Gm11433-201ENSMUST00000118318 228 ntBASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Llph-ps1-201ENSMUST00000121281 390 ntBASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Gm13009-201ENSMUST00000121307 267 ntBASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Gm12001-201ENSMUST00000121727 913 ntBASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Gm25605-201ENSMUST00000158364 124 ntBASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC4.02□□□□□ -1.77
Trim3Q9R1R2 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Gm27427-201ENSMUST00000185134 193 ntBASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Gm28685-201ENSMUST00000187545 1101 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms