Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm43354-201ENSMUST00000196862 346 ntBASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Gm43405-201ENSMUST00000198642 337 ntBASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Gm44385-201ENSMUST00000198781 81 ntBASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Gm19921-201ENSMUST00000210505 703 ntBASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Gm18924-201ENSMUST00000211929 316 ntBASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Gm18103-201ENSMUST00000216621 779 ntBASIC5.65□□□□□ -1.5
Trim39Q9ESN2 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC5.65□□□□□ -1.5
Trim39Q9ESN2 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC5.65□□□□□ -1.5
Trim39Q9ESN2 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC5.65□□□□□ -1.5
Trim39Q9ESN2 AC121966.1-201ENSMUST00000221458 282 ntBASIC5.65□□□□□ -1.5
Trim39Q9ESN2 AC165092.4-201ENSMUST00000225025 679 ntBASIC5.65□□□□□ -1.5
Trim39Q9ESN2 AC120553.1-201ENSMUST00000227313 260 ntBASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Gm37668-201ENSMUST00000193745 1944 ntBASIC5.65□□□□□ -1.51
Trim39Q9ESN2 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC5.65□□□□□ -1.51
Trim39Q9ESN2 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Trim39Q9ESN2 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Trim39Q9ESN2 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Trim39Q9ESN2 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Trim39Q9ESN2 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC5.65□□□□□ -1.51
Trim39Q9ESN2 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.51
Trim39Q9ESN2 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Trim39Q9ESN2 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm37485-201ENSMUST00000192326 2953 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm38065-201ENSMUST00000193147 3492 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Trim39Q9ESN2 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm45426-201ENSMUST00000209393 3672 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm44045-201ENSMUST00000204906 2520 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm26376-201ENSMUST00000104784 110 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm14355-201ENSMUST00000117352 264 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm12149-201ENSMUST00000117511 654 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm13311-201ENSMUST00000117863 379 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm13176-201ENSMUST00000117910 477 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm12806-201ENSMUST00000119384 268 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm11609-201ENSMUST00000121926 793 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm14333-201ENSMUST00000130484 264 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm22336-201ENSMUST00000157719 107 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Mir1953-201ENSMUST00000157866 89 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm24359-201ENSMUST00000158418 221 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Mir7212-201ENSMUST00000184098 61 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm28885-201ENSMUST00000185615 563 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm29385-201ENSMUST00000186831 363 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm28785-201ENSMUST00000187478 379 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm37191-201ENSMUST00000193346 388 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm2147-201ENSMUST00000193588 639 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm37375-201ENSMUST00000193859 387 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm37385-201ENSMUST00000195223 387 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm18551-201ENSMUST00000195594 642 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm36382-201ENSMUST00000198892 541 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm2623-201ENSMUST00000199229 286 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm43798-201ENSMUST00000202056 394 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm29785-201ENSMUST00000217033 383 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm9068-201ENSMUST00000217393 455 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC5.64□□□□□ -1.51
Trim39Q9ESN2 AC105407.1-201ENSMUST00000225684 614 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 AC154563.1-201ENSMUST00000228317 442 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Gm22829-201ENSMUST00000083771 106 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Trim39Q9ESN2 AC156031.1-201ENSMUST00000217288 2555 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Trim39Q9ESN2 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trim39Q9ESN2 AC151971.5-201ENSMUST00000214422 3254 ntBASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trim39Q9ESN2 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Trim39Q9ESN2 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Trim39Q9ESN2 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Trim39Q9ESN2 AC187103.2-201ENSMUST00000223605 1617 ntBASIC5.63□□□□□ -1.51
Trim39Q9ESN2 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Trim39Q9ESN2 AC132852.2-201ENSMUST00000216052 2794 ntBASIC5.63□□□□□ -1.51
Trim39Q9ESN2 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms