Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm37670-201ENSMUST00000193622 229 ntBASIC3.92□□□□□ -1.78
Lima1Q9ERG0 Gm43855-201ENSMUST00000197462 507 ntBASIC3.92□□□□□ -1.78
Lima1Q9ERG0 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC3.92□□□□□ -1.78
Lima1Q9ERG0 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC3.92□□□□□ -1.78
Lima1Q9ERG0 AC156559.1-201ENSMUST00000224158 222 ntBASIC3.92□□□□□ -1.78
Lima1Q9ERG0 AC154592.1-201ENSMUST00000225784 574 ntBASIC3.92□□□□□ -1.78
Lima1Q9ERG0 AC168881.1-201ENSMUST00000226018 430 ntBASIC3.92□□□□□ -1.78
Lima1Q9ERG0 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Lima1Q9ERG0 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Lima1Q9ERG0 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Lima1Q9ERG0 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Lima1Q9ERG0 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Lima1Q9ERG0 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Lima1Q9ERG0 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
Lima1Q9ERG0 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC3.92□□□□□ -1.78
Lima1Q9ERG0 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Lima1Q9ERG0 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Lima1Q9ERG0 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
Lima1Q9ERG0 AC154677.1-201ENSMUST00000227636 2805 ntBASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Gm25537-201ENSMUST00000103851 109 ntBASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Gm22778-201ENSMUST00000104090 128 ntBASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Gm12467-201ENSMUST00000117625 745 ntBASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Gm13118-201ENSMUST00000120402 549 ntBASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Gm25150-201ENSMUST00000157121 60 ntBASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Mir5106-201ENSMUST00000174936 73 ntBASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC3.91□□□□□ -1.78
Lima1Q9ERG0 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Gm20954-201ENSMUST00000189078 644 ntBASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Gm8823-201ENSMUST00000193158 433 ntBASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Gm37300-201ENSMUST00000193327 280 ntBASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Gm37088-201ENSMUST00000193887 406 ntBASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Gm38104-201ENSMUST00000195121 1895 ntBASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Gm9238-201ENSMUST00000196181 329 ntBASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Mir7682-201ENSMUST00000198467 58 ntBASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Gm43841-201ENSMUST00000199491 586 ntBASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Lima1Q9ERG0 CT025680.1-201ENSMUST00000217375 375 ntBASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Lima1Q9ERG0 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Lima1Q9ERG0 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Lima1Q9ERG0 AC154323.3-201ENSMUST00000226927 1660 ntBASIC3.9□□□□□ -1.78
Lima1Q9ERG0 Gm3616-201ENSMUST00000174430 2514 ntBASIC3.9□□□□□ -1.78
Lima1Q9ERG0 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.9□□□□□ -1.78
Lima1Q9ERG0 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
Lima1Q9ERG0 Gm37626-201ENSMUST00000194332 4563 ntBASIC3.9□□□□□ -1.78
Lima1Q9ERG0 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
Lima1Q9ERG0 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Lima1Q9ERG0 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.78
Lima1Q9ERG0 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC3.9□□□□□ -1.78
Lima1Q9ERG0 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Lima1Q9ERG0 Gm24469-201ENSMUST00000104487 131 ntBASIC3.9□□□□□ -1.79
Lima1Q9ERG0 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC3.9□□□□□ -1.79
Lima1Q9ERG0 Gm14628-201ENSMUST00000117508 635 ntBASIC3.9□□□□□ -1.79
Lima1Q9ERG0 Gm12173-201ENSMUST00000117622 273 ntBASIC3.9□□□□□ -1.79
Lima1Q9ERG0 Gm13501-201ENSMUST00000118477 979 ntBASIC3.9□□□□□ -1.79
Lima1Q9ERG0 Gm13155-201ENSMUST00000119277 646 ntBASIC3.9□□□□□ -1.79
Lima1Q9ERG0 Gm13743-201ENSMUST00000121486 724 ntBASIC3.9□□□□□ -1.79
Lima1Q9ERG0 Gm8178-201ENSMUST00000121570 646 ntBASIC3.9□□□□□ -1.79
Lima1Q9ERG0 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC3.9□□□□□ -1.79
Lima1Q9ERG0 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Lima1Q9ERG0 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC3.9□□□□□ -1.79
Lima1Q9ERG0 Mir1947-201ENSMUST00000158235 85 ntBASIC3.9□□□□□ -1.79
Lima1Q9ERG0 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Lima1Q9ERG0 Gm25019-201ENSMUST00000179732 110 ntBASIC3.9□□□□□ -1.79
Lima1Q9ERG0 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC3.9□□□□□ -1.79
Lima1Q9ERG0 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Lima1Q9ERG0 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.79
Lima1Q9ERG0 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Lima1Q9ERG0 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Lima1Q9ERG0 CR974592.1-201ENSMUST00000220422 574 ntBASIC3.9□□□□□ -1.79
Lima1Q9ERG0 AC154198.1-201ENSMUST00000222839 424 ntBASIC3.9□□□□□ -1.79
Lima1Q9ERG0 AC126690.1-201ENSMUST00000228898 397 ntBASIC3.9□□□□□ -1.79
Lima1Q9ERG0 Mir383-201ENSMUST00000083523 70 ntBASIC3.9□□□□□ -1.79
Lima1Q9ERG0 Gm22868-201ENSMUST00000083955 164 ntBASIC3.9□□□□□ -1.79
Lima1Q9ERG0 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Lima1Q9ERG0 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Lima1Q9ERG0 Gm9343-201ENSMUST00000209016 2609 ntBASIC3.9□□□□□ -1.79
Lima1Q9ERG0 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
Lima1Q9ERG0 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Lima1Q9ERG0 Gm37211-201ENSMUST00000193392 3433 ntBASIC3.89□□□□□ -1.79
Lima1Q9ERG0 Gm24318-201ENSMUST00000104490 131 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 113.2 ms