Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 AC153516.1-201ENSMUST00000217955 779 ntBASIC3.91□□□□□ -1.78
Cdc40Q9DC48 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Cdc40Q9DC48 Olfr480-201ENSMUST00000071658 1029 ntBASIC3.91□□□□□ -1.78
Cdc40Q9DC48 n-R5s162-201ENSMUST00000082581 119 ntBASIC3.91□□□□□ -1.78
Cdc40Q9DC48 Gm24917-201ENSMUST00000083935 104 ntBASIC3.91□□□□□ -1.78
Cdc40Q9DC48 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Cdc40Q9DC48 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Cdc40Q9DC48 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Cdc40Q9DC48 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Cdc40Q9DC48 Gm45483-201ENSMUST00000209845 1682 ntBASIC3.9□□□□□ -1.78
Cdc40Q9DC48 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
Cdc40Q9DC48 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Cdc40Q9DC48 Gm43059-201ENSMUST00000202437 1388 ntBASIC3.9□□□□□ -1.78
Cdc40Q9DC48 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
Cdc40Q9DC48 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Cdc40Q9DC48 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
Cdc40Q9DC48 Gm37668-201ENSMUST00000193745 1944 ntBASIC3.9□□□□□ -1.78
Cdc40Q9DC48 Gm13100-201ENSMUST00000117157 1439 ntBASIC3.9□□□□□ -1.78
Cdc40Q9DC48 Snora64-201ENSMUST00000104521 134 ntBASIC3.9□□□□□ -1.79
Cdc40Q9DC48 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC3.9□□□□□ -1.79
Cdc40Q9DC48 Gm13366-201ENSMUST00000122198 970 ntBASIC3.9□□□□□ -1.79
Cdc40Q9DC48 Gm25292-201ENSMUST00000122797 322 ntBASIC3.9□□□□□ -1.79
Cdc40Q9DC48 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC3.9□□□□□ -1.79
Cdc40Q9DC48 Gm23467-201ENSMUST00000157127 159 ntBASIC3.9□□□□□ -1.79
Cdc40Q9DC48 Gm23228-201ENSMUST00000157296 270 ntBASIC3.9□□□□□ -1.79
Cdc40Q9DC48 Gm5263-201ENSMUST00000163646 601 ntBASIC3.9□□□□□ -1.79
Cdc40Q9DC48 Gm3191-201ENSMUST00000167139 346 ntBASIC3.9□□□□□ -1.79
Cdc40Q9DC48 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC3.9□□□□□ -1.79
Cdc40Q9DC48 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Cdc40Q9DC48 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Cdc40Q9DC48 Gm29428-201ENSMUST00000190086 409 ntBASIC3.9□□□□□ -1.79
Cdc40Q9DC48 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Cdc40Q9DC48 Gm38283-201ENSMUST00000193041 695 ntBASIC3.9□□□□□ -1.79
Cdc40Q9DC48 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC3.9□□□□□ -1.79
Cdc40Q9DC48 Gm43774-201ENSMUST00000196327 878 ntBASIC3.9□□□□□ -1.79
Cdc40Q9DC48 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC3.9□□□□□ -1.79
Cdc40Q9DC48 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Cdc40Q9DC48 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC3.9□□□□□ -1.79
Cdc40Q9DC48 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC3.9□□□□□ -1.79
Cdc40Q9DC48 Gm7588-201ENSMUST00000216866 571 ntBASIC3.9□□□□□ -1.79
Cdc40Q9DC48 AC122448.1-201ENSMUST00000226317 772 ntBASIC3.9□□□□□ -1.79
Cdc40Q9DC48 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Cdc40Q9DC48 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Cdc40Q9DC48 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Cdc40Q9DC48 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Cdc40Q9DC48 Gm10042-201ENSMUST00000079884 78 ntBASIC3.9□□□□□ -1.79
Cdc40Q9DC48 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Cdc40Q9DC48 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Cdc40Q9DC48 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Cdc40Q9DC48 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Cdc40Q9DC48 AC124346.2-201ENSMUST00000217986 5083 ntBASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Gm7452-202ENSMUST00000202891 3039 ntBASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Gm24541-201ENSMUST00000103871 96 ntBASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Gm13557-201ENSMUST00000120771 382 ntBASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Gm14122-201ENSMUST00000122076 973 ntBASIC3.89□□□□□ -1.79
Cdc40Q9DC48 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Gm22816-201ENSMUST00000157450 117 ntBASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Gm26001-201ENSMUST00000157989 103 ntBASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Gm22156-201ENSMUST00000158409 141 ntBASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Gm17153-201ENSMUST00000171314 490 ntBASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Gm5473-201ENSMUST00000179326 642 ntBASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Gm37293-201ENSMUST00000191658 295 ntBASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Trbv11-201ENSMUST00000194354 260 ntBASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Gm44765-201ENSMUST00000206927 601 ntBASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Gm44946-201ENSMUST00000208425 572 ntBASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Gm45574-201ENSMUST00000210921 331 ntBASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Cdc40Q9DC48 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC3.89□□□□□ -1.79
Cdc40Q9DC48 AC155921.1-201ENSMUST00000216568 3841 ntBASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Gm18891-201ENSMUST00000216734 1087 ntBASIC3.89□□□□□ -1.79
Cdc40Q9DC48 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Cdc40Q9DC48 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC3.89□□□□□ -1.79
Cdc40Q9DC48 AC117656.3-205ENSMUST00000224606 1205 ntBASIC3.89□□□□□ -1.79
Cdc40Q9DC48 AC126253.2-201ENSMUST00000226518 205 ntBASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Gm5548-201ENSMUST00000055878 397 ntBASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Gm44435-201ENSMUST00000204379 4119 ntBASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Cdc40Q9DC48 AC142245.1-201ENSMUST00000226611 1505 ntBASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Gm12667-201ENSMUST00000118299 1332 ntBASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Gm45033-201ENSMUST00000206710 3167 ntBASIC3.89□□□□□ -1.79
Cdc40Q9DC48 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC3.89□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms