Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Ccdc3Q9D6Y1 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc3Q9D6Y1 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc3Q9D6Y1 Gm43705-201ENSMUST00000195958 3717 ntBASIC3.97□□□□□ -1.77
Ccdc3Q9D6Y1 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc3Q9D6Y1 Gm13100-201ENSMUST00000117157 1439 ntBASIC3.97□□□□□ -1.77
Ccdc3Q9D6Y1 Gm42537-201ENSMUST00000198260 2574 ntBASIC3.97□□□□□ -1.77
Ccdc3Q9D6Y1 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
Ccdc3Q9D6Y1 Gm44847-201ENSMUST00000207104 1991 ntBASIC3.97□□□□□ -1.77
Ccdc3Q9D6Y1 Gm24581-201ENSMUST00000103962 133 ntBASIC3.97□□□□□ -1.77
Ccdc3Q9D6Y1 Gm13478-201ENSMUST00000118312 413 ntBASIC3.97□□□□□ -1.77
Ccdc3Q9D6Y1 Gm5060-201ENSMUST00000120072 599 ntBASIC3.97□□□□□ -1.77
Ccdc3Q9D6Y1 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC3.97□□□□□ -1.77
Ccdc3Q9D6Y1 Gm24850-201ENSMUST00000158029 119 ntBASIC3.97□□□□□ -1.77
Ccdc3Q9D6Y1 Gm25553-201ENSMUST00000158076 79 ntBASIC3.97□□□□□ -1.77
Ccdc3Q9D6Y1 Gm3339-201ENSMUST00000163462 475 ntBASIC3.97□□□□□ -1.77
Ccdc3Q9D6Y1 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Ccdc3Q9D6Y1 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC3.97□□□□□ -1.77
Ccdc3Q9D6Y1 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC3.97□□□□□ -1.77
Ccdc3Q9D6Y1 Gm37241-201ENSMUST00000191736 523 ntBASIC3.97□□□□□ -1.77
Ccdc3Q9D6Y1 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC3.97□□□□□ -1.77
Ccdc3Q9D6Y1 Gm43892-201ENSMUST00000204373 265 ntBASIC3.97□□□□□ -1.77
Ccdc3Q9D6Y1 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC3.97□□□□□ -1.77
Ccdc3Q9D6Y1 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC3.97□□□□□ -1.77
Ccdc3Q9D6Y1 Fth-ps3-201ENSMUST00000210405 358 ntBASIC3.97□□□□□ -1.77
Ccdc3Q9D6Y1 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC3.97□□□□□ -1.77
Ccdc3Q9D6Y1 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.97□□□□□ -1.77
Ccdc3Q9D6Y1 Gm7381-201ENSMUST00000098958 300 ntBASIC3.97□□□□□ -1.77
Ccdc3Q9D6Y1 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc3Q9D6Y1 Gm37626-201ENSMUST00000194332 4563 ntBASIC3.97□□□□□ -1.77
Ccdc3Q9D6Y1 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Ccdc3Q9D6Y1 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Ccdc3Q9D6Y1 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC3.97□□□□□ -1.77
Ccdc3Q9D6Y1 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc3Q9D6Y1 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
Ccdc3Q9D6Y1 Gm43341-201ENSMUST00000200104 1308 ntBASIC3.96□□□□□ -1.77
Ccdc3Q9D6Y1 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.77
Ccdc3Q9D6Y1 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
Ccdc3Q9D6Y1 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
Ccdc3Q9D6Y1 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
Ccdc3Q9D6Y1 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Ccdc3Q9D6Y1 AC152162.1-201ENSMUST00000225910 2917 ntBASIC3.96□□□□□ -1.78
Ccdc3Q9D6Y1 Gm7195-201ENSMUST00000190869 1707 ntBASIC3.96□□□□□ -1.78
Ccdc3Q9D6Y1 Gm37045-201ENSMUST00000192016 2463 ntBASIC3.96□□□□□ -1.78
Ccdc3Q9D6Y1 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
Ccdc3Q9D6Y1 Gm17752-201ENSMUST00000185787 3726 ntBASIC3.96□□□□□ -1.78
Ccdc3Q9D6Y1 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Ccdc3Q9D6Y1 Gm15151-201ENSMUST00000117106 177 ntBASIC3.96□□□□□ -1.78
Ccdc3Q9D6Y1 Gm14299-201ENSMUST00000117586 397 ntBASIC3.96□□□□□ -1.78
Ccdc3Q9D6Y1 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC3.96□□□□□ -1.78
Ccdc3Q9D6Y1 Gm22135-201ENSMUST00000158752 108 ntBASIC3.96□□□□□ -1.78
Ccdc3Q9D6Y1 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Ccdc3Q9D6Y1 Gm6650-201ENSMUST00000166710 614 ntBASIC3.96□□□□□ -1.78
Ccdc3Q9D6Y1 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Ccdc3Q9D6Y1 Gm25817-201ENSMUST00000177758 121 ntBASIC3.96□□□□□ -1.78
Ccdc3Q9D6Y1 Gm24766-201ENSMUST00000179182 121 ntBASIC3.96□□□□□ -1.78
Ccdc3Q9D6Y1 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.96□□□□□ -1.78
Ccdc3Q9D6Y1 Gm19057-201ENSMUST00000194329 1197 ntBASIC3.96□□□□□ -1.78
Ccdc3Q9D6Y1 Gm43649-201ENSMUST00000196596 391 ntBASIC3.96□□□□□ -1.78
Ccdc3Q9D6Y1 Gm36259-201ENSMUST00000197340 392 ntBASIC3.96□□□□□ -1.78
Ccdc3Q9D6Y1 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Ccdc3Q9D6Y1 Gm43028-201ENSMUST00000202561 481 ntBASIC3.96□□□□□ -1.78
Ccdc3Q9D6Y1 Gm8703-201ENSMUST00000203793 730 ntBASIC3.96□□□□□ -1.78
Ccdc3Q9D6Y1 Gm8132-201ENSMUST00000204938 640 ntBASIC3.96□□□□□ -1.78
Ccdc3Q9D6Y1 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC3.96□□□□□ -1.78
Ccdc3Q9D6Y1 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC3.96□□□□□ -1.78
Ccdc3Q9D6Y1 AC135377.1-201ENSMUST00000223692 463 ntBASIC3.96□□□□□ -1.78
Ccdc3Q9D6Y1 AC168059.1-201ENSMUST00000225846 841 ntBASIC3.96□□□□□ -1.78
Ccdc3Q9D6Y1 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Ccdc3Q9D6Y1 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Ccdc3Q9D6Y1 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Ccdc3Q9D6Y1 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Ccdc3Q9D6Y1 AC124346.2-201ENSMUST00000217986 5083 ntBASIC3.96□□□□□ -1.78
Ccdc3Q9D6Y1 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Ccdc3Q9D6Y1 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
Ccdc3Q9D6Y1 Gm43658-201ENSMUST00000202348 4176 ntBASIC3.95□□□□□ -1.78
Ccdc3Q9D6Y1 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
Ccdc3Q9D6Y1 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
Ccdc3Q9D6Y1 AC173482.1-201ENSMUST00000224494 3815 ntBASIC3.95□□□□□ -1.78
Ccdc3Q9D6Y1 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Ccdc3Q9D6Y1 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Ccdc3Q9D6Y1 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
Ccdc3Q9D6Y1 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Ccdc3Q9D6Y1 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Ccdc3Q9D6Y1 Gm24403-201ENSMUST00000104616 130 ntBASIC3.95□□□□□ -1.78
Ccdc3Q9D6Y1 Gm12931-201ENSMUST00000117046 324 ntBASIC3.95□□□□□ -1.78
Ccdc3Q9D6Y1 Gm15313-201ENSMUST00000119179 282 ntBASIC3.95□□□□□ -1.78
Ccdc3Q9D6Y1 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC3.95□□□□□ -1.78
Ccdc3Q9D6Y1 Gm22792-201ENSMUST00000157225 133 ntBASIC3.95□□□□□ -1.78
Ccdc3Q9D6Y1 Gm10357-201ENSMUST00000159886 264 ntBASIC3.95□□□□□ -1.78
Ccdc3Q9D6Y1 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Ccdc3Q9D6Y1 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Ccdc3Q9D6Y1 Gm27636-201ENSMUST00000184528 122 ntBASIC3.95□□□□□ -1.78
Ccdc3Q9D6Y1 Gm19503-201ENSMUST00000187109 241 ntBASIC3.95□□□□□ -1.78
Ccdc3Q9D6Y1 Gm38061-201ENSMUST00000192490 365 ntBASIC3.95□□□□□ -1.78
Ccdc3Q9D6Y1 Gm43814-201ENSMUST00000197851 413 ntBASIC3.95□□□□□ -1.78
Ccdc3Q9D6Y1 Gm43044-201ENSMUST00000198091 379 ntBASIC3.95□□□□□ -1.78
Ccdc3Q9D6Y1 Gm42453-201ENSMUST00000200477 409 ntBASIC3.95□□□□□ -1.78
Ccdc3Q9D6Y1 Gm44003-201ENSMUST00000203024 490 ntBASIC3.95□□□□□ -1.78
Ccdc3Q9D6Y1 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC3.95□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms