Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Vps28Q9D1C8 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Vps28Q9D1C8 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC4.68□□□□□ -1.66
Vps28Q9D1C8 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC4.68□□□□□ -1.66
Vps28Q9D1C8 Gm29884-201ENSMUST00000218403 453 ntBASIC4.68□□□□□ -1.66
Vps28Q9D1C8 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC4.68□□□□□ -1.66
Vps28Q9D1C8 Nsa2-203ENSMUST00000225410 974 ntBASIC4.68□□□□□ -1.66
Vps28Q9D1C8 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Vps28Q9D1C8 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Vps28Q9D1C8 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Vps28Q9D1C8 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Vps28Q9D1C8 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Vps28Q9D1C8 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Vps28Q9D1C8 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Vps28Q9D1C8 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Vps28Q9D1C8 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Vps28Q9D1C8 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Vps28Q9D1C8 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Vps28Q9D1C8 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Vps28Q9D1C8 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Vps28Q9D1C8 Gm42729-201ENSMUST00000201770 2930 ntBASIC4.68□□□□□ -1.66
Vps28Q9D1C8 Gm38260-201ENSMUST00000193573 3995 ntBASIC4.68□□□□□ -1.66
Vps28Q9D1C8 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Vps28Q9D1C8 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Vps28Q9D1C8 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Gm42842-201ENSMUST00000197736 3004 ntBASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Vps28Q9D1C8 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Gm24469-201ENSMUST00000104487 131 ntBASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Gm15148-201ENSMUST00000117602 156 ntBASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Gm14878-201ENSMUST00000118167 293 ntBASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Gm11881-201ENSMUST00000119408 572 ntBASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Gm15719-201ENSMUST00000120619 635 ntBASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Gm14500-201ENSMUST00000121647 113 ntBASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Gm2892-201ENSMUST00000145537 711 ntBASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Gm27568-201ENSMUST00000184220 99 ntBASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Gm37167-201ENSMUST00000194946 396 ntBASIC4.67□□□□□ -1.66
Vps28Q9D1C8 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC4.67□□□□□ -1.66
Vps28Q9D1C8 AC132384.13-201ENSMUST00000219556 1159 ntBASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Gm3338-201ENSMUST00000220982 269 ntBASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC4.67□□□□□ -1.66
Vps28Q9D1C8 CT025525.1-201ENSMUST00000226325 1054 ntBASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Gm6462-201ENSMUST00000081488 304 ntBASIC4.67□□□□□ -1.66
Vps28Q9D1C8 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Mir99a-201ENSMUST00000083596 65 ntBASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Vps28Q9D1C8 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Vps28Q9D1C8 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Gm42701-201ENSMUST00000196117 1657 ntBASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Vps28Q9D1C8 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC4.66□□□□□ -1.66
Vps28Q9D1C8 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Vps28Q9D1C8 Gm6215-201ENSMUST00000119297 1386 ntBASIC4.66□□□□□ -1.66
Vps28Q9D1C8 Gm42852-201ENSMUST00000202649 1379 ntBASIC4.66□□□□□ -1.66
Vps28Q9D1C8 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Vps28Q9D1C8 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC4.66□□□□□ -1.66
Vps28Q9D1C8 AC113059.3-201ENSMUST00000217423 2777 ntBASIC4.66□□□□□ -1.66
Vps28Q9D1C8 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Vps28Q9D1C8 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Vps28Q9D1C8 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.66□□□□□ -1.66
Vps28Q9D1C8 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Vps28Q9D1C8 Gm37831-201ENSMUST00000191685 1787 ntBASIC4.66□□□□□ -1.66
Vps28Q9D1C8 Gm13477-201ENSMUST00000121620 2687 ntBASIC4.66□□□□□ -1.66
Vps28Q9D1C8 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Vps28Q9D1C8 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Vps28Q9D1C8 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC4.66□□□□□ -1.66
Vps28Q9D1C8 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC4.66□□□□□ -1.66
Vps28Q9D1C8 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC4.66□□□□□ -1.66
Vps28Q9D1C8 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Vps28Q9D1C8 Gm23906-201ENSMUST00000157573 128 ntBASIC4.66□□□□□ -1.66
Vps28Q9D1C8 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Vps28Q9D1C8 Gm16490-201ENSMUST00000165299 351 ntBASIC4.66□□□□□ -1.66
Vps28Q9D1C8 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Vps28Q9D1C8 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Vps28Q9D1C8 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Vps28Q9D1C8 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC4.66□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms