Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm23972-201ENSMUST00000083322 165 ntBASIC5.34□□□□□ -1.55
Ddx56Q9D0R4 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Ddx56Q9D0R4 Gm3972-201ENSMUST00000173960 2861 ntBASIC5.34□□□□□ -1.55
Ddx56Q9D0R4 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Ddx56Q9D0R4 Gm13477-201ENSMUST00000121620 2687 ntBASIC5.34□□□□□ -1.55
Ddx56Q9D0R4 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Ddx56Q9D0R4 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ddx56Q9D0R4 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Ddx56Q9D0R4 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Ddx56Q9D0R4 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC5.34□□□□□ -1.56
Ddx56Q9D0R4 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Ddx56Q9D0R4 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
Ddx56Q9D0R4 Gm37064-201ENSMUST00000193851 2231 ntBASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 AC159326.1-201ENSMUST00000219989 1302 ntBASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Mir190b-201ENSMUST00000104803 80 ntBASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Gm12495-201ENSMUST00000119750 447 ntBASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Gm13973-201ENSMUST00000121371 894 ntBASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Gm9613-201ENSMUST00000171662 196 ntBASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Gm27233-201ENSMUST00000184030 307 ntBASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Gm6075-201ENSMUST00000186816 486 ntBASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Ighv1-27-201ENSMUST00000194473 340 ntBASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 BX530055.1-201ENSMUST00000197285 122 ntBASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Gm7540-201ENSMUST00000219764 926 ntBASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 AC165092.2-201ENSMUST00000224681 368 ntBASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 AV026068-231ENSMUST00000225862 482 ntBASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Gm45483-201ENSMUST00000209845 1682 ntBASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Gm18853-201ENSMUST00000183629 3596 ntBASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 AC131329.1-201ENSMUST00000221204 3487 ntBASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC5.33□□□□□ -1.56
Ddx56Q9D0R4 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 Gm43130-201ENSMUST00000197721 3907 ntBASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 Gm28359-201ENSMUST00000187470 1322 ntBASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 Gm38010-201ENSMUST00000192592 2784 ntBASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 Gm15185-201ENSMUST00000117397 746 ntBASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 Gm16431-201ENSMUST00000117454 431 ntBASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 Gm15195-201ENSMUST00000118775 263 ntBASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 Gm14901-201ENSMUST00000119001 283 ntBASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 Gm11625-201ENSMUST00000119535 296 ntBASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 Gm6591-201ENSMUST00000121063 434 ntBASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 Defa-ps14-201ENSMUST00000121373 418 ntBASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 Gm10319-202ENSMUST00000159439 846 ntBASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 Gm44776-201ENSMUST00000207212 381 ntBASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 AC137127.3-201ENSMUST00000213340 349 ntBASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 AC112956.1-201ENSMUST00000213563 492 ntBASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 Gm18252-203ENSMUST00000215855 757 ntBASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 Olfr151-202ENSMUST00000221099 929 ntBASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 AC144733.1-201ENSMUST00000222893 1289 ntBASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 AC154305.3-201ENSMUST00000224661 552 ntBASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 AC241593.2-201ENSMUST00000225099 510 ntBASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 AC154598.1-201ENSMUST00000227079 347 ntBASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Ddx56Q9D0R4 Gm24525-201ENSMUST00000082917 151 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 127.2 ms