Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm28976-201ENSMUST00000188070 144 ntBASIC6.1□□□□□ -1.43
Clp1Q99LI9 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC6.1□□□□□ -1.43
Clp1Q99LI9 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC6.1□□□□□ -1.43
Clp1Q99LI9 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC6.1□□□□□ -1.43
Clp1Q99LI9 Ighv1-35-201ENSMUST00000195265 351 ntBASIC6.1□□□□□ -1.43
Clp1Q99LI9 Gm43624-201ENSMUST00000197368 180 ntBASIC6.1□□□□□ -1.43
Clp1Q99LI9 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Gm45660-201ENSMUST00000210267 151 ntBASIC6.1□□□□□ -1.43
Clp1Q99LI9 Gm6929-201ENSMUST00000210930 468 ntBASIC6.1□□□□□ -1.43
Clp1Q99LI9 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC6.1□□□□□ -1.43
Clp1Q99LI9 AC125399.1-201ENSMUST00000224236 595 ntBASIC6.1□□□□□ -1.43
Clp1Q99LI9 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Gm23455-201ENSMUST00000083331 100 ntBASIC6.1□□□□□ -1.43
Clp1Q99LI9 Mir19a-201ENSMUST00000083482 82 ntBASIC6.1□□□□□ -1.43
Clp1Q99LI9 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Gm42686-201ENSMUST00000199172 4108 ntBASIC6.1□□□□□ -1.43
Clp1Q99LI9 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Clp1Q99LI9 AC121942.1-201ENSMUST00000224459 2891 ntBASIC6.1□□□□□ -1.43
Clp1Q99LI9 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Clp1Q99LI9 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Gm37621-201ENSMUST00000194716 5531 ntBASIC6.1□□□□□ -1.43
Clp1Q99LI9 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC6.09□□□□□ -1.43
Clp1Q99LI9 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Clp1Q99LI9 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm45644-201ENSMUST00000210255 2740 ntBASIC6.09□□□□□ -1.43
Clp1Q99LI9 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm16089-201ENSMUST00000117679 336 ntBASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm9308-201ENSMUST00000119073 448 ntBASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm13711-201ENSMUST00000119708 453 ntBASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm13338-201ENSMUST00000120235 361 ntBASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm11677-201ENSMUST00000121349 977 ntBASIC6.09□□□□□ -1.43
Clp1Q99LI9 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm22597-201ENSMUST00000157602 80 ntBASIC6.09□□□□□ -1.43
Clp1Q99LI9 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC6.09□□□□□ -1.43
Clp1Q99LI9 Mir3112-201ENSMUST00000175431 82 ntBASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm24757-201ENSMUST00000176987 371 ntBASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms