Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm11406-201ENSMUST00000117418 484 ntBASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Gm12186-201ENSMUST00000119050 945 ntBASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Gm14797-201ENSMUST00000119378 1480 ntBASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Gm13902-201ENSMUST00000120168 605 ntBASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Gm14725-201ENSMUST00000120324 828 ntBASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Gm14784-201ENSMUST00000121604 663 ntBASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Gm24774-201ENSMUST00000157384 134 ntBASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Gm24507-201ENSMUST00000157683 134 ntBASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Mup-ps7-201ENSMUST00000178292 545 ntBASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Mup-ps8-201ENSMUST00000178663 545 ntBASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Mup-ps9-201ENSMUST00000178847 545 ntBASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Mup-ps6-201ENSMUST00000179564 545 ntBASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Brf1Q8CFK2 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Gm29138-201ENSMUST00000191444 348 ntBASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Gm37636-201ENSMUST00000193583 359 ntBASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Gm37514-201ENSMUST00000194512 2753 ntBASIC5.61□□□□□ -1.51
Brf1Q8CFK2 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Brf1Q8CFK2 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Gm45912-201ENSMUST00000210646 543 ntBASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Brf1Q8CFK2 AC156950.1-201ENSMUST00000219604 456 ntBASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC5.61□□□□□ -1.51
Brf1Q8CFK2 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Gm35755-201ENSMUST00000222392 2077 ntBASIC5.61□□□□□ -1.51
Brf1Q8CFK2 AC124433.2-201ENSMUST00000223867 291 ntBASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Gm25134-201ENSMUST00000082646 160 ntBASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Gm24150-201ENSMUST00000082759 104 ntBASIC5.61□□□□□ -1.51
Brf1Q8CFK2 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Gm21286-201ENSMUST00000098035 545 ntBASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Gm44668-201ENSMUST00000207911 3265 ntBASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Gm2123-201ENSMUST00000221476 2836 ntBASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Gm45555-201ENSMUST00000210028 2602 ntBASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Brf1Q8CFK2 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gm14790-201ENSMUST00000117760 1293 ntBASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gm11212-201ENSMUST00000118337 618 ntBASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gm7485-201ENSMUST00000119502 1109 ntBASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gm14238-201ENSMUST00000120227 323 ntBASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gm5391-201ENSMUST00000121155 613 ntBASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gm22478-201ENSMUST00000122570 154 ntBASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gm5353-201ENSMUST00000139800 793 ntBASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gm22793-201ENSMUST00000157227 330 ntBASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gm24251-201ENSMUST00000157324 114 ntBASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gm26347-201ENSMUST00000157526 131 ntBASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gm26393-201ENSMUST00000157625 129 ntBASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gm23022-201ENSMUST00000158768 180 ntBASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gm5558-201ENSMUST00000178933 495 ntBASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gm21241-201ENSMUST00000179551 934 ntBASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Mir7022-201ENSMUST00000183749 61 ntBASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gm27163-201ENSMUST00000184767 409 ntBASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Brf1Q8CFK2 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gm20871-201ENSMUST00000191322 931 ntBASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gm42958-201ENSMUST00000197595 318 ntBASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gm29793-201ENSMUST00000202874 460 ntBASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gm45857-201ENSMUST00000212207 356 ntBASIC5.6□□□□□ -1.51
Brf1Q8CFK2 AL772265.1-201ENSMUST00000214379 305 ntBASIC5.6□□□□□ -1.51
Brf1Q8CFK2 Gm46234-201ENSMUST00000218702 259 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms