Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Pcdhb7Q8CDY9 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Pcdhb7Q8CDY9 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Pcdhb7Q8CDY9 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC6.18□□□□□ -1.42
Pcdhb7Q8CDY9 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Pcdhb7Q8CDY9 Gm38096-201ENSMUST00000193692 2389 ntBASIC6.18□□□□□ -1.42
Pcdhb7Q8CDY9 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Pcdhb7Q8CDY9 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Pcdhb7Q8CDY9 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Pcdhb7Q8CDY9 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Pcdhb7Q8CDY9 AC121870.1-201ENSMUST00000216279 4879 ntBASIC6.18□□□□□ -1.42
Pcdhb7Q8CDY9 Gm43266-201ENSMUST00000201049 1771 ntBASIC6.18□□□□□ -1.42
Pcdhb7Q8CDY9 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Pcdhb7Q8CDY9 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Pcdhb7Q8CDY9 AC121960.2-201ENSMUST00000227349 3446 ntBASIC6.18□□□□□ -1.42
Pcdhb7Q8CDY9 Gm42819-201ENSMUST00000199630 5121 ntBASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Gm43891-201ENSMUST00000205132 3112 ntBASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Gm11781-201ENSMUST00000118328 472 ntBASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Gm12137-201ENSMUST00000119565 346 ntBASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Gm25387-201ENSMUST00000157813 132 ntBASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Gm26211-201ENSMUST00000158578 129 ntBASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Gm23864-201ENSMUST00000177607 107 ntBASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Gm38030-201ENSMUST00000192376 475 ntBASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Gm7626-201ENSMUST00000195801 353 ntBASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 AC158803.1-201ENSMUST00000219495 316 ntBASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Gm23412-201ENSMUST00000083017 107 ntBASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Gm26128-201ENSMUST00000083170 110 ntBASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Gm23459-201ENSMUST00000083259 131 ntBASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Gm43088-201ENSMUST00000197530 2347 ntBASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC6.17□□□□□ -1.42
Pcdhb7Q8CDY9 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Gm45644-201ENSMUST00000210255 2740 ntBASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 AC154627.2-201ENSMUST00000227028 4669 ntBASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Gm44193-201ENSMUST00000204822 2523 ntBASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Gm14142-201ENSMUST00000117833 296 ntBASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Gm13880-201ENSMUST00000118421 474 ntBASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Gm14577-201ENSMUST00000121134 256 ntBASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Gm11472-201ENSMUST00000121305 556 ntBASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Gm12369-201ENSMUST00000121343 942 ntBASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Gm15164-201ENSMUST00000122203 271 ntBASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Gm15147-201ENSMUST00000122263 483 ntBASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Gm26348-201ENSMUST00000157528 240 ntBASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Gm24689-201ENSMUST00000157760 104 ntBASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Mir1953-201ENSMUST00000157866 89 ntBASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Gm17062-201ENSMUST00000166987 461 ntBASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms