Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Mir582-201ENSMUST00000103758 81 ntBASIC5.5□□□□□ -1.53
Vps53Q8CCB4 Mir669l-201ENSMUST00000103771 98 ntBASIC5.5□□□□□ -1.53
Vps53Q8CCB4 Gm2348-201ENSMUST00000108782 300 ntBASIC5.5□□□□□ -1.53
Vps53Q8CCB4 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC5.5□□□□□ -1.53
Vps53Q8CCB4 Gm14007-201ENSMUST00000118288 210 ntBASIC5.5□□□□□ -1.53
Vps53Q8CCB4 Gm14906-201ENSMUST00000119265 390 ntBASIC5.5□□□□□ -1.53
Vps53Q8CCB4 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC5.5□□□□□ -1.53
Vps53Q8CCB4 Gm3221-201ENSMUST00000164869 440 ntBASIC5.5□□□□□ -1.53
Vps53Q8CCB4 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Vps53Q8CCB4 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC5.5□□□□□ -1.53
Vps53Q8CCB4 Mir6933-201ENSMUST00000184982 81 ntBASIC5.5□□□□□ -1.53
Vps53Q8CCB4 Gm28389-201ENSMUST00000190090 697 ntBASIC5.5□□□□□ -1.53
Vps53Q8CCB4 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC5.5□□□□□ -1.53
Vps53Q8CCB4 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC5.5□□□□□ -1.53
Vps53Q8CCB4 Gm43350-201ENSMUST00000196382 711 ntBASIC5.5□□□□□ -1.53
Vps53Q8CCB4 Igkv12-40-201ENSMUST00000199208 347 ntBASIC5.5□□□□□ -1.53
Vps53Q8CCB4 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC5.5□□□□□ -1.53
Vps53Q8CCB4 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC5.5□□□□□ -1.53
Vps53Q8CCB4 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Vps53Q8CCB4 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC5.5□□□□□ -1.53
Vps53Q8CCB4 Gm8106-201ENSMUST00000213123 523 ntBASIC5.5□□□□□ -1.53
Vps53Q8CCB4 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC5.5□□□□□ -1.53
Vps53Q8CCB4 CT030705.1-201ENSMUST00000223971 533 ntBASIC5.5□□□□□ -1.53
Vps53Q8CCB4 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Vps53Q8CCB4 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Vps53Q8CCB4 Olfr881-201ENSMUST00000074611 948 ntBASIC5.5□□□□□ -1.53
Vps53Q8CCB4 Gm24166-201ENSMUST00000082724 135 ntBASIC5.5□□□□□ -1.53
Vps53Q8CCB4 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Vps53Q8CCB4 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
Vps53Q8CCB4 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC5.5□□□□□ -1.53
Vps53Q8CCB4 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC5.5□□□□□ -1.53
Vps53Q8CCB4 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Vps53Q8CCB4 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Gm43009-201ENSMUST00000199979 3566 ntBASIC5.49□□□□□ -1.53
Vps53Q8CCB4 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Gm14304-201ENSMUST00000117272 446 ntBASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Gm12261-201ENSMUST00000117499 645 ntBASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Gm13815-201ENSMUST00000119963 412 ntBASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Gm25427-201ENSMUST00000157605 103 ntBASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Gm23046-201ENSMUST00000158369 284 ntBASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Gm23023-201ENSMUST00000158767 109 ntBASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Gm29073-201ENSMUST00000185563 664 ntBASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Gm29165-201ENSMUST00000190655 664 ntBASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Gm29211-201ENSMUST00000191470 664 ntBASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Gm8599-201ENSMUST00000193033 457 ntBASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Gm37167-201ENSMUST00000194946 396 ntBASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Gm45651-201ENSMUST00000210857 335 ntBASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC5.49□□□□□ -1.53
Vps53Q8CCB4 AC166263.1-201ENSMUST00000218586 238 ntBASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC5.49□□□□□ -1.53
Vps53Q8CCB4 AC192616.3-201ENSMUST00000220797 1124 ntBASIC5.49□□□□□ -1.53
Vps53Q8CCB4 CT025689.2-201ENSMUST00000224979 429 ntBASIC5.49□□□□□ -1.53
Vps53Q8CCB4 AC139294.1-201ENSMUST00000226708 571 ntBASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Gm7204-201ENSMUST00000062591 600 ntBASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Gm23302-201ENSMUST00000082710 100 ntBASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Gm24707-201ENSMUST00000082812 107 ntBASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Mir99a-201ENSMUST00000083596 65 ntBASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Gm25004-201ENSMUST00000083811 161 ntBASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Gm42548-201ENSMUST00000202669 3933 ntBASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Vps53Q8CCB4 AC115034.1-201ENSMUST00000215393 3846 ntBASIC5.49□□□□□ -1.53
Vps53Q8CCB4 AC156632.1-201ENSMUST00000220626 3845 ntBASIC5.49□□□□□ -1.53
Vps53Q8CCB4 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Vps53Q8CCB4 AC123705.2-201ENSMUST00000221653 2009 ntBASIC5.48□□□□□ -1.53
Vps53Q8CCB4 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Vps53Q8CCB4 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Vps53Q8CCB4 AC124426.1-203ENSMUST00000221814 1362 ntBASIC5.48□□□□□ -1.53
Vps53Q8CCB4 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Vps53Q8CCB4 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Vps53Q8CCB4 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC5.48□□□□□ -1.53
Vps53Q8CCB4 Gm12393-201ENSMUST00000117084 848 ntBASIC5.48□□□□□ -1.53
Vps53Q8CCB4 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC5.48□□□□□ -1.53
Vps53Q8CCB4 Gm8129-201ENSMUST00000118230 213 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 100.9 ms