Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.43□□□□□ -1.86
Col6a6Q8C6K9 Gm26556-201ENSMUST00000180645 320 ntBASIC3.43□□□□□ -1.86
Col6a6Q8C6K9 Gm29588-201ENSMUST00000185738 298 ntBASIC3.43□□□□□ -1.86
Col6a6Q8C6K9 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC3.43□□□□□ -1.86
Col6a6Q8C6K9 Gm42552-201ENSMUST00000196754 4497 ntBASIC3.43□□□□□ -1.86
Col6a6Q8C6K9 Gm43665-201ENSMUST00000198672 1659 ntBASIC3.43□□□□□ -1.86
Col6a6Q8C6K9 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC3.43□□□□□ -1.86
Col6a6Q8C6K9 Gm43929-201ENSMUST00000203025 409 ntBASIC3.43□□□□□ -1.86
Col6a6Q8C6K9 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Col6a6Q8C6K9 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Col6a6Q8C6K9 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Col6a6Q8C6K9 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Col6a6Q8C6K9 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC3.43□□□□□ -1.86
Col6a6Q8C6K9 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC3.43□□□□□ -1.86
Col6a6Q8C6K9 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Col6a6Q8C6K9 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Col6a6Q8C6K9 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC3.42□□□□□ -1.86
Col6a6Q8C6K9 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.42□□□□□ -1.86
Col6a6Q8C6K9 Gm13386-201ENSMUST00000117677 124 ntBASIC3.42□□□□□ -1.86
Col6a6Q8C6K9 Gm14875-201ENSMUST00000120881 319 ntBASIC3.42□□□□□ -1.86
Col6a6Q8C6K9 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC3.42□□□□□ -1.86
Col6a6Q8C6K9 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Col6a6Q8C6K9 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC3.42□□□□□ -1.86
Col6a6Q8C6K9 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC3.42□□□□□ -1.86
Col6a6Q8C6K9 AC152415.1-201ENSMUST00000213320 440 ntBASIC3.42□□□□□ -1.86
Col6a6Q8C6K9 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a6Q8C6K9 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a6Q8C6K9 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.42□□□□□ -1.86
Col6a6Q8C6K9 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a6Q8C6K9 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Col6a6Q8C6K9 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Col6a6Q8C6K9 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Col6a6Q8C6K9 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a6Q8C6K9 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a6Q8C6K9 Gm14806-201ENSMUST00000116606 2110 ntBASIC3.42□□□□□ -1.86
Col6a6Q8C6K9 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Col6a6Q8C6K9 Gm14825-201ENSMUST00000113538 701 ntBASIC3.42□□□□□ -1.86
Col6a6Q8C6K9 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a6Q8C6K9 Gm12760-201ENSMUST00000117861 482 ntBASIC3.42□□□□□ -1.86
Col6a6Q8C6K9 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a6Q8C6K9 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.42□□□□□ -1.86
Col6a6Q8C6K9 AC140368.1-202ENSMUST00000226131 658 ntBASIC3.42□□□□□ -1.86
Col6a6Q8C6K9 AC133101.1-201ENSMUST00000226939 1199 ntBASIC3.42□□□□□ -1.86
Col6a6Q8C6K9 Gm10916-201ENSMUST00000080330 483 ntBASIC3.42□□□□□ -1.86
Col6a6Q8C6K9 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC3.42□□□□□ -1.86
Col6a6Q8C6K9 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a6Q8C6K9 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.42□□□□□ -1.86
Col6a6Q8C6K9 Gm37776-201ENSMUST00000193471 2497 ntBASIC3.42□□□□□ -1.86
Col6a6Q8C6K9 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a6Q8C6K9 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a6Q8C6K9 AC149294.7-201ENSMUST00000227475 1432 ntBASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 Mir673-201ENSMUST00000102361 91 ntBASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 Gm5133-201ENSMUST00000118940 1255 ntBASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 Gm15057-201ENSMUST00000121516 534 ntBASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 Gm24138-201ENSMUST00000157572 114 ntBASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 Mir7081-201ENSMUST00000184490 75 ntBASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 Stk-ps2-204ENSMUST00000187808 616 ntBASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 Gm28997-201ENSMUST00000188759 429 ntBASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 Gm24533-201ENSMUST00000083138 196 ntBASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 Gm21037-201ENSMUST00000209086 2608 ntBASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 Gm12982-201ENSMUST00000117408 190 ntBASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 Gm4322-201ENSMUST00000191094 336 ntBASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 Gm35876-201ENSMUST00000205044 459 ntBASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 Gm6171-201ENSMUST00000220760 645 ntBASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 CT485612.3-201ENSMUST00000222179 408 ntBASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 Gm42728-201ENSMUST00000202644 1552 ntBASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Col6a6Q8C6K9 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Col6a6Q8C6K9 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.4□□□□□ -1.86
Col6a6Q8C6K9 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Col6a6Q8C6K9 Gm20775-201ENSMUST00000100115 1851 ntBASIC3.4□□□□□ -1.86
Col6a6Q8C6K9 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.86
Col6a6Q8C6K9 Gm12683-201ENSMUST00000117528 415 ntBASIC3.4□□□□□ -1.86
Col6a6Q8C6K9 Gm15613-201ENSMUST00000118396 326 ntBASIC3.4□□□□□ -1.86
Col6a6Q8C6K9 Gm12311-201ENSMUST00000118803 374 ntBASIC3.4□□□□□ -1.86
Col6a6Q8C6K9 Gm12087-201ENSMUST00000121878 258 ntBASIC3.4□□□□□ -1.86
Col6a6Q8C6K9 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
Col6a6Q8C6K9 Gm23855-201ENSMUST00000158377 135 ntBASIC3.4□□□□□ -1.86
Col6a6Q8C6K9 Gm15946-201ENSMUST00000160654 423 ntBASIC3.4□□□□□ -1.86
Col6a6Q8C6K9 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 7.4 ms