Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 Gm17075-201ENSMUST00000171924 670 ntBASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 Gm18354-201ENSMUST00000173515 1068 ntBASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 Gm22177-201ENSMUST00000175002 158 ntBASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 AC161250.1-201ENSMUST00000213426 1111 ntBASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 AC153532.1-201ENSMUST00000218126 1111 ntBASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 AC154239.2-201ENSMUST00000227859 233 ntBASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 Gm7204-201ENSMUST00000062591 600 ntBASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 Mir202-201ENSMUST00000083568 72 ntBASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 Gm22826-201ENSMUST00000083774 165 ntBASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 AC120375.2-201ENSMUST00000226532 1853 ntBASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 Gm44078-201ENSMUST00000204652 2646 ntBASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 Gm43886-201ENSMUST00000205039 2386 ntBASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.69
Ccdc40Q8BI79 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 AC142245.1-201ENSMUST00000226611 1505 ntBASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 Gm13865-201ENSMUST00000120957 865 ntBASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 Gm14907-201ENSMUST00000121948 854 ntBASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 Gm13745-201ENSMUST00000121994 527 ntBASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 Gm24380-201ENSMUST00000122696 324 ntBASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 Gm7855-201ENSMUST00000137737 687 ntBASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 Ear-ps7-201ENSMUST00000161287 442 ntBASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 Gm29588-201ENSMUST00000185738 298 ntBASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 Gm37111-201ENSMUST00000193250 634 ntBASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 Gm18877-201ENSMUST00000207706 539 ntBASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 Gm45499-201ENSMUST00000211656 280 ntBASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 Ap3m1-208ENSMUST00000224016 764 ntBASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 AL662807.1-201ENSMUST00000224183 126 ntBASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 CT025525.3-201ENSMUST00000228858 366 ntBASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 Apoo-ps-201ENSMUST00000061241 586 ntBASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 Gm26176-201ENSMUST00000083795 105 ntBASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 Gm22868-201ENSMUST00000083955 164 ntBASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 AC153969.1-201ENSMUST00000214047 2605 ntBASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Ccdc40Q8BI79 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.51□□□□□ -1.69
Ccdc40Q8BI79 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.51□□□□□ -1.69
Ccdc40Q8BI79 Gm37006-201ENSMUST00000195253 2674 ntBASIC4.51□□□□□ -1.69
Ccdc40Q8BI79 AC126673.3-201ENSMUST00000223414 3829 ntBASIC4.51□□□□□ -1.69
Ccdc40Q8BI79 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Ccdc40Q8BI79 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
Ccdc40Q8BI79 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Ccdc40Q8BI79 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Ccdc40Q8BI79 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Ccdc40Q8BI79 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
Ccdc40Q8BI79 Gm14304-201ENSMUST00000117272 446 ntBASIC4.51□□□□□ -1.69
Ccdc40Q8BI79 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ccdc40Q8BI79 Gm14905-201ENSMUST00000122351 639 ntBASIC4.51□□□□□ -1.69
Ccdc40Q8BI79 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC4.51□□□□□ -1.69
Ccdc40Q8BI79 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Ccdc40Q8BI79 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.51□□□□□ -1.69
Ccdc40Q8BI79 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC4.51□□□□□ -1.69
Ccdc40Q8BI79 Gm21045-201ENSMUST00000183058 1020 ntBASIC4.51□□□□□ -1.69
Ccdc40Q8BI79 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC4.51□□□□□ -1.69
Ccdc40Q8BI79 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC4.51□□□□□ -1.69
Ccdc40Q8BI79 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.51□□□□□ -1.69
Ccdc40Q8BI79 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.51□□□□□ -1.69
Ccdc40Q8BI79 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC4.51□□□□□ -1.69
Ccdc40Q8BI79 Gm37418-201ENSMUST00000195031 274 ntBASIC4.51□□□□□ -1.69
Ccdc40Q8BI79 Gm18861-201ENSMUST00000202509 1186 ntBASIC4.51□□□□□ -1.69
Ccdc40Q8BI79 Gm43580-201ENSMUST00000202892 284 ntBASIC4.51□□□□□ -1.69
Ccdc40Q8BI79 AC166263.1-201ENSMUST00000218586 238 ntBASIC4.51□□□□□ -1.69
Ccdc40Q8BI79 AC109180.1-201ENSMUST00000218676 398 ntBASIC4.51□□□□□ -1.69
Ccdc40Q8BI79 Gm46190-201ENSMUST00000219650 427 ntBASIC4.51□□□□□ -1.69
Ccdc40Q8BI79 Gm5185-201ENSMUST00000080271 619 ntBASIC4.51□□□□□ -1.69
Ccdc40Q8BI79 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ccdc40Q8BI79 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC4.51□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 107.4 ms