Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Ccdc88aQ5SNZ0 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.55□□□□□ -1.68
Ccdc88aQ5SNZ0 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
Ccdc88aQ5SNZ0 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Ccdc88aQ5SNZ0 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Ccdc88aQ5SNZ0 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Ccdc88aQ5SNZ0 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm38031-201ENSMUST00000191819 3015 ntBASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm24067-201ENSMUST00000104514 85 ntBASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm12095-201ENSMUST00000121962 816 ntBASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm4725-201ENSMUST00000151048 587 ntBASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm7634-201ENSMUST00000185778 553 ntBASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm42832-201ENSMUST00000196361 745 ntBASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm42665-201ENSMUST00000202100 586 ntBASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm44600-201ENSMUST00000208540 111 ntBASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm9712-201ENSMUST00000210842 311 ntBASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm7439-201ENSMUST00000214053 835 ntBASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 AC154738.2-201ENSMUST00000227403 1110 ntBASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm9765-201ENSMUST00000043170 321 ntBASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm43648-201ENSMUST00000197775 2485 ntBASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm38065-201ENSMUST00000193147 3492 ntBASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm11403-201ENSMUST00000122195 369 ntBASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm10067-201ENSMUST00000179462 348 ntBASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm29104-201ENSMUST00000186304 222 ntBASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm37617-201ENSMUST00000194309 159 ntBASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 Mir128-1-201ENSMUST00000083586 70 ntBASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 Mir504-201ENSMUST00000093602 79 ntBASIC4.54□□□□□ -1.68
Ccdc88aQ5SNZ0 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm38374-201ENSMUST00000194417 2033 ntBASIC4.53□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm37777-201ENSMUST00000195546 3366 ntBASIC4.53□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Ccdc88aQ5SNZ0 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Ccdc88aQ5SNZ0 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ccdc88aQ5SNZ0 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Ccdc88aQ5SNZ0 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm42728-201ENSMUST00000202644 1552 ntBASIC4.53□□□□□ -1.68
Ccdc88aQ5SNZ0 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Ccdc88aQ5SNZ0 AC154323.3-201ENSMUST00000226927 1660 ntBASIC4.53□□□□□ -1.68
Ccdc88aQ5SNZ0 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm12125-201ENSMUST00000117261 736 ntBASIC4.53□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm11971-201ENSMUST00000117715 288 ntBASIC4.53□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm15994-201ENSMUST00000118029 402 ntBASIC4.53□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC4.53□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm11281-201ENSMUST00000141391 576 ntBASIC4.53□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm24014-201ENSMUST00000157728 157 ntBASIC4.53□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm25535-201ENSMUST00000175364 125 ntBASIC4.53□□□□□ -1.68
Ccdc88aQ5SNZ0 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Ccdc88aQ5SNZ0 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC4.53□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm42666-201ENSMUST00000201954 152 ntBASIC4.53□□□□□ -1.68
Ccdc88aQ5SNZ0 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.53□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm7639-201ENSMUST00000212608 484 ntBASIC4.53□□□□□ -1.68
Ccdc88aQ5SNZ0 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm18903-201ENSMUST00000215343 480 ntBASIC4.53□□□□□ -1.68
Ccdc88aQ5SNZ0 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Ccdc88aQ5SNZ0 AC138718.1-201ENSMUST00000225947 1009 ntBASIC4.53□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm22739-201ENSMUST00000083437 160 ntBASIC4.53□□□□□ -1.68
Ccdc88aQ5SNZ0 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm38126-201ENSMUST00000195297 4003 ntBASIC4.53□□□□□ -1.68
Ccdc88aQ5SNZ0 Fbxw23-202ENSMUST00000198480 1388 ntBASIC4.53□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm15902-202ENSMUST00000219623 3477 ntBASIC4.52□□□□□ -1.69
Ccdc88aQ5SNZ0 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Ccdc88aQ5SNZ0 Gm4736-201ENSMUST00000100870 380 ntBASIC4.52□□□□□ -1.69
Ccdc88aQ5SNZ0 Gm13664-201ENSMUST00000117304 345 ntBASIC4.52□□□□□ -1.69
Ccdc88aQ5SNZ0 Gm15613-201ENSMUST00000118396 326 ntBASIC4.52□□□□□ -1.69
Ccdc88aQ5SNZ0 Gm11645-201ENSMUST00000121589 649 ntBASIC4.52□□□□□ -1.69
Ccdc88aQ5SNZ0 Gm12412-201ENSMUST00000121867 328 ntBASIC4.52□□□□□ -1.69
Ccdc88aQ5SNZ0 Gm43276-201ENSMUST00000199712 364 ntBASIC4.52□□□□□ -1.69
Ccdc88aQ5SNZ0 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Ccdc88aQ5SNZ0 Gm8774-201ENSMUST00000203621 692 ntBASIC4.52□□□□□ -1.69
Ccdc88aQ5SNZ0 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC4.52□□□□□ -1.69
Ccdc88aQ5SNZ0 AC127270.2-201ENSMUST00000221337 247 ntBASIC4.52□□□□□ -1.69
Ccdc88aQ5SNZ0 CT485612.3-201ENSMUST00000222179 408 ntBASIC4.52□□□□□ -1.69
Ccdc88aQ5SNZ0 Gm22155-201ENSMUST00000083836 162 ntBASIC4.52□□□□□ -1.69
Ccdc88aQ5SNZ0 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Ccdc88aQ5SNZ0 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.52□□□□□ -1.69
Ccdc88aQ5SNZ0 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Ccdc88aQ5SNZ0 AC167420.1-201ENSMUST00000222999 2121 ntBASIC4.52□□□□□ -1.69
Ccdc88aQ5SNZ0 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Ccdc88aQ5SNZ0 Gm38207-201ENSMUST00000193009 3505 ntBASIC4.52□□□□□ -1.69
Ccdc88aQ5SNZ0 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms