Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm6245-201ENSMUST00000164699 768 ntBASIC4.92□□□□□ -1.62
Trim58Q5NCC9 Gm6625-201ENSMUST00000177870 272 ntBASIC4.92□□□□□ -1.62
Trim58Q5NCC9 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC4.92□□□□□ -1.62
Trim58Q5NCC9 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC4.92□□□□□ -1.62
Trim58Q5NCC9 Gm29747-201ENSMUST00000194764 585 ntBASIC4.92□□□□□ -1.62
Trim58Q5NCC9 Gm38088-201ENSMUST00000195829 241 ntBASIC4.92□□□□□ -1.62
Trim58Q5NCC9 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC4.92□□□□□ -1.62
Trim58Q5NCC9 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC4.92□□□□□ -1.62
Trim58Q5NCC9 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC4.92□□□□□ -1.62
Trim58Q5NCC9 Gm44431-201ENSMUST00000203500 413 ntBASIC4.92□□□□□ -1.62
Trim58Q5NCC9 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
Trim58Q5NCC9 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Trim58Q5NCC9 AC124356.2-201ENSMUST00000221874 336 ntBASIC4.92□□□□□ -1.62
Trim58Q5NCC9 AC122448.1-201ENSMUST00000226317 772 ntBASIC4.92□□□□□ -1.62
Trim58Q5NCC9 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.92□□□□□ -1.62
Trim58Q5NCC9 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Trim58Q5NCC9 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Trim58Q5NCC9 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.91□□□□□ -1.62
Trim58Q5NCC9 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
Trim58Q5NCC9 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Trim58Q5NCC9 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Trim58Q5NCC9 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Trim58Q5NCC9 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Trim58Q5NCC9 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC4.91□□□□□ -1.62
Trim58Q5NCC9 Gm11403-201ENSMUST00000122195 369 ntBASIC4.91□□□□□ -1.62
Trim58Q5NCC9 Gm26476-201ENSMUST00000122618 313 ntBASIC4.91□□□□□ -1.62
Trim58Q5NCC9 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC4.91□□□□□ -1.62
Trim58Q5NCC9 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Trim58Q5NCC9 Gm22219-201ENSMUST00000157562 319 ntBASIC4.91□□□□□ -1.62
Trim58Q5NCC9 Gm23591-201ENSMUST00000157663 286 ntBASIC4.91□□□□□ -1.62
Trim58Q5NCC9 Gm24976-201ENSMUST00000158972 135 ntBASIC4.91□□□□□ -1.62
Trim58Q5NCC9 Gm17060-201ENSMUST00000172394 824 ntBASIC4.91□□□□□ -1.62
Trim58Q5NCC9 Gm26556-201ENSMUST00000180645 320 ntBASIC4.91□□□□□ -1.62
Trim58Q5NCC9 Gm28615-201ENSMUST00000187527 482 ntBASIC4.91□□□□□ -1.62
Trim58Q5NCC9 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC4.91□□□□□ -1.62
Trim58Q5NCC9 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC4.91□□□□□ -1.62
Trim58Q5NCC9 Gm37416-201ENSMUST00000193596 318 ntBASIC4.91□□□□□ -1.62
Trim58Q5NCC9 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Trim58Q5NCC9 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC4.91□□□□□ -1.62
Trim58Q5NCC9 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
Trim58Q5NCC9 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Trim58Q5NCC9 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Trim58Q5NCC9 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Trim58Q5NCC9 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Trim58Q5NCC9 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
Trim58Q5NCC9 Gm5155-201ENSMUST00000072381 2841 ntBASIC4.91□□□□□ -1.62
Trim58Q5NCC9 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
Trim58Q5NCC9 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Trim58Q5NCC9 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
Trim58Q5NCC9 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Trim58Q5NCC9 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Trim58Q5NCC9 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Trim58Q5NCC9 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Trim58Q5NCC9 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Trim58Q5NCC9 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
Trim58Q5NCC9 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Trim58Q5NCC9 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Trim58Q5NCC9 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Trim58Q5NCC9 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
Trim58Q5NCC9 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
Trim58Q5NCC9 Klra11-ps-201ENSMUST00000122033 810 ntBASIC4.9□□□□□ -1.63
Trim58Q5NCC9 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Trim58Q5NCC9 Gm23082-201ENSMUST00000157852 133 ntBASIC4.9□□□□□ -1.63
Trim58Q5NCC9 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Trim58Q5NCC9 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC4.9□□□□□ -1.63
Trim58Q5NCC9 Gm21045-201ENSMUST00000183058 1020 ntBASIC4.9□□□□□ -1.63
Trim58Q5NCC9 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Trim58Q5NCC9 Gm17916-202ENSMUST00000187634 1187 ntBASIC4.9□□□□□ -1.63
Trim58Q5NCC9 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC4.9□□□□□ -1.63
Trim58Q5NCC9 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC4.9□□□□□ -1.63
Trim58Q5NCC9 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Trim58Q5NCC9 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC4.9□□□□□ -1.63
Trim58Q5NCC9 Gm44521-201ENSMUST00000206469 217 ntBASIC4.9□□□□□ -1.63
Trim58Q5NCC9 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC4.9□□□□□ -1.63
Trim58Q5NCC9 AC153870.1-201ENSMUST00000219599 560 ntBASIC4.9□□□□□ -1.63
Trim58Q5NCC9 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Trim58Q5NCC9 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Trim58Q5NCC9 Gm23443-201ENSMUST00000082916 128 ntBASIC4.9□□□□□ -1.63
Trim58Q5NCC9 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Trim58Q5NCC9 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
Trim58Q5NCC9 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Trim58Q5NCC9 Gm43793-201ENSMUST00000201645 1333 ntBASIC4.9□□□□□ -1.63
Trim58Q5NCC9 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
Trim58Q5NCC9 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Trim58Q5NCC9 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC4.9□□□□□ -1.63
Trim58Q5NCC9 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Trim58Q5NCC9 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Trim58Q5NCC9 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Trim58Q5NCC9 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC4.89□□□□□ -1.63
Trim58Q5NCC9 Gm12288-201ENSMUST00000121054 1282 ntBASIC4.89□□□□□ -1.63
Trim58Q5NCC9 Gm13440-201ENSMUST00000121665 496 ntBASIC4.89□□□□□ -1.63
Trim58Q5NCC9 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC4.89□□□□□ -1.63
Trim58Q5NCC9 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Trim58Q5NCC9 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC4.89□□□□□ -1.63
Trim58Q5NCC9 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC4.89□□□□□ -1.63
Trim58Q5NCC9 Gm22917-201ENSMUST00000180116 110 ntBASIC4.89□□□□□ -1.63
Trim58Q5NCC9 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Trim58Q5NCC9 Mir6986-201ENSMUST00000184483 58 ntBASIC4.89□□□□□ -1.63
Trim58Q5NCC9 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Trim58Q5NCC9 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 98.6 ms