Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm7041-201ENSMUST00000201227 524 ntBASIC6.34□□□□□ -1.4
Ccdc88bQ4QRL3 Gm42458-201ENSMUST00000201914 369 ntBASIC6.34□□□□□ -1.4
Ccdc88bQ4QRL3 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Ccdc88bQ4QRL3 AC133517.1-202ENSMUST00000224409 233 ntBASIC6.34□□□□□ -1.4
Ccdc88bQ4QRL3 AC166095.1-203ENSMUST00000224591 233 ntBASIC6.34□□□□□ -1.4
Ccdc88bQ4QRL3 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
Ccdc88bQ4QRL3 Gm23518-201ENSMUST00000082835 153 ntBASIC6.34□□□□□ -1.4
Ccdc88bQ4QRL3 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Ccdc88bQ4QRL3 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
Ccdc88bQ4QRL3 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Ccdc88bQ4QRL3 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC6.33□□□□□ -1.4
Ccdc88bQ4QRL3 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ccdc88bQ4QRL3 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC6.33□□□□□ -1.4
Ccdc88bQ4QRL3 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC6.33□□□□□ -1.4
Ccdc88bQ4QRL3 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc88bQ4QRL3 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Ccdc88bQ4QRL3 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ccdc88bQ4QRL3 AC113059.2-201ENSMUST00000213462 3016 ntBASIC6.33□□□□□ -1.4
Ccdc88bQ4QRL3 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ccdc88bQ4QRL3 Gm22480-201ENSMUST00000122568 128 ntBASIC6.33□□□□□ -1.4
Ccdc88bQ4QRL3 Gm26476-201ENSMUST00000122618 313 ntBASIC6.33□□□□□ -1.4
Ccdc88bQ4QRL3 Gm18352-201ENSMUST00000189113 902 ntBASIC6.33□□□□□ -1.4
Ccdc88bQ4QRL3 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc88bQ4QRL3 Gm44118-201ENSMUST00000204665 229 ntBASIC6.33□□□□□ -1.4
Ccdc88bQ4QRL3 AC132465.3-201ENSMUST00000219326 195 ntBASIC6.33□□□□□ -1.4
Ccdc88bQ4QRL3 Gm3565-201ENSMUST00000222670 609 ntBASIC6.33□□□□□ -1.4
Ccdc88bQ4QRL3 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ccdc88bQ4QRL3 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC6.33□□□□□ -1.4
Ccdc88bQ4QRL3 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC6.33□□□□□ -1.4
Ccdc88bQ4QRL3 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc88bQ4QRL3 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc88bQ4QRL3 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc88bQ4QRL3 Gm44120-201ENSMUST00000203022 3023 ntBASIC6.32□□□□□ -1.4
Ccdc88bQ4QRL3 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Ccdc88bQ4QRL3 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc88bQ4QRL3 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.32□□□□□ -1.4
Ccdc88bQ4QRL3 Gm13321-201ENSMUST00000117101 400 ntBASIC6.32□□□□□ -1.4
Ccdc88bQ4QRL3 Gm8757-201ENSMUST00000119660 372 ntBASIC6.32□□□□□ -1.4
Ccdc88bQ4QRL3 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC6.32□□□□□ -1.4
Ccdc88bQ4QRL3 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC6.32□□□□□ -1.4
Ccdc88bQ4QRL3 Gm42428-201ENSMUST00000198677 302 ntBASIC6.32□□□□□ -1.4
Ccdc88bQ4QRL3 AC152415.1-201ENSMUST00000213320 440 ntBASIC6.32□□□□□ -1.4
Ccdc88bQ4QRL3 AC153954.2-201ENSMUST00000213811 287 ntBASIC6.32□□□□□ -1.4
Ccdc88bQ4QRL3 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC6.32□□□□□ -1.4
Ccdc88bQ4QRL3 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc88bQ4QRL3 AC124489.2-201ENSMUST00000223930 589 ntBASIC6.32□□□□□ -1.4
Ccdc88bQ4QRL3 AC138718.1-201ENSMUST00000225947 1009 ntBASIC6.32□□□□□ -1.4
Ccdc88bQ4QRL3 Gm23302-201ENSMUST00000082710 100 ntBASIC6.32□□□□□ -1.4
Ccdc88bQ4QRL3 Gm23297-201ENSMUST00000083184 127 ntBASIC6.32□□□□□ -1.4
Ccdc88bQ4QRL3 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc88bQ4QRL3 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ccdc88bQ4QRL3 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc88bQ4QRL3 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Ccdc88bQ4QRL3 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Ccdc88bQ4QRL3 Gm11600-201ENSMUST00000119592 240 ntBASIC6.31□□□□□ -1.4
Ccdc88bQ4QRL3 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC6.31□□□□□ -1.4
Ccdc88bQ4QRL3 Gm24008-201ENSMUST00000157733 138 ntBASIC6.31□□□□□ -1.4
Ccdc88bQ4QRL3 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Ccdc88bQ4QRL3 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Ccdc88bQ4QRL3 Gm8641-201ENSMUST00000186995 826 ntBASIC6.31□□□□□ -1.4
Ccdc88bQ4QRL3 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC6.31□□□□□ -1.4
Ccdc88bQ4QRL3 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Ccdc88bQ4QRL3 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Ccdc88bQ4QRL3 AC154441.1-201ENSMUST00000223653 1006 ntBASIC6.31□□□□□ -1.4
Ccdc88bQ4QRL3 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Ccdc88bQ4QRL3 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc88bQ4QRL3 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc88bQ4QRL3 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Ccdc88bQ4QRL3 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Ccdc88bQ4QRL3 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Ccdc88bQ4QRL3 Gm43341-201ENSMUST00000200104 1308 ntBASIC6.3□□□□□ -1.4
Ccdc88bQ4QRL3 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Ccdc88bQ4QRL3 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
Ccdc88bQ4QRL3 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Ccdc88bQ4QRL3 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Ccdc88bQ4QRL3 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Ccdc88bQ4QRL3 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC6.3□□□□□ -1.4
Ccdc88bQ4QRL3 Mir1934-201ENSMUST00000158127 83 ntBASIC6.3□□□□□ -1.4
Ccdc88bQ4QRL3 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC6.3□□□□□ -1.4
Ccdc88bQ4QRL3 Olfr895-201ENSMUST00000093864 951 ntBASIC6.3□□□□□ -1.4
Ccdc88bQ4QRL3 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc88bQ4QRL3 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Ccdc88bQ4QRL3 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc88bQ4QRL3 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC6.3□□□□□ -1.4
Ccdc88bQ4QRL3 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc88bQ4QRL3 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC6.29□□□□□ -1.4
Ccdc88bQ4QRL3 Gm23540-201ENSMUST00000157543 164 ntBASIC6.29□□□□□ -1.4
Ccdc88bQ4QRL3 Gm23121-201ENSMUST00000157653 173 ntBASIC6.29□□□□□ -1.4
Ccdc88bQ4QRL3 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC6.29□□□□□ -1.4
Ccdc88bQ4QRL3 Gm37617-201ENSMUST00000194309 159 ntBASIC6.29□□□□□ -1.4
Ccdc88bQ4QRL3 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC6.29□□□□□ -1.4
Ccdc88bQ4QRL3 Gm44690-201ENSMUST00000207984 382 ntBASIC6.29□□□□□ -1.4
Ccdc88bQ4QRL3 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC6.29□□□□□ -1.4
Ccdc88bQ4QRL3 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ccdc88bQ4QRL3 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ccdc88bQ4QRL3 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ccdc88bQ4QRL3 Gm37345-201ENSMUST00000193062 3138 ntBASIC6.29□□□□□ -1.4
Ccdc88bQ4QRL3 Gm43665-201ENSMUST00000198672 1659 ntBASIC6.29□□□□□ -1.4
Ccdc88bQ4QRL3 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc88bQ4QRL3 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms