Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Gm21850-201ENSMUST00000179792 359 ntBASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Gm21960-201ENSMUST00000181924 452 ntBASIC4.03□□□□□ -1.76
Trim40Q3UWA4 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Gm29086-201ENSMUST00000186774 222 ntBASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Gm29085-201ENSMUST00000187108 225 ntBASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Gm5252-201ENSMUST00000189030 909 ntBASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Gm22897-201ENSMUST00000197860 128 ntBASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Gm43476-201ENSMUST00000197873 405 ntBASIC4.03□□□□□ -1.76
Trim40Q3UWA4 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC4.03□□□□□ -1.76
Trim40Q3UWA4 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Gm45189-201ENSMUST00000208567 363 ntBASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Gm45236-201ENSMUST00000208632 229 ntBASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC4.03□□□□□ -1.76
Trim40Q3UWA4 CT571256.1-201ENSMUST00000226045 585 ntBASIC4.03□□□□□ -1.76
Trim40Q3UWA4 AC155237.2-201ENSMUST00000228487 478 ntBASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Trim40Q3UWA4 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Gm24031-201ENSMUST00000083930 131 ntBASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.77
Trim40Q3UWA4 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trim40Q3UWA4 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Gm13451-201ENSMUST00000117649 592 ntBASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Gm11708-201ENSMUST00000119530 832 ntBASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Gm13009-201ENSMUST00000121307 267 ntBASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Gm14303-201ENSMUST00000121320 171 ntBASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Gm5401-201ENSMUST00000122444 365 ntBASIC4.02□□□□□ -1.77
Trim40Q3UWA4 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Gm24251-201ENSMUST00000157324 114 ntBASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Gm17043-201ENSMUST00000164621 1283 ntBASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Mir7022-201ENSMUST00000183749 61 ntBASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Gm18382-201ENSMUST00000194394 582 ntBASIC4.02□□□□□ -1.77
Trim40Q3UWA4 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Gm31520-201ENSMUST00000203048 733 ntBASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Gm44023-201ENSMUST00000203710 469 ntBASIC4.02□□□□□ -1.77
Trim40Q3UWA4 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Trim40Q3UWA4 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Gm44681-201ENSMUST00000208447 842 ntBASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Gm8264-201ENSMUST00000217801 465 ntBASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC4.02□□□□□ -1.77
Trim40Q3UWA4 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Gm26449-201ENSMUST00000082452 104 ntBASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Snord15b-201ENSMUST00000083032 145 ntBASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Gm37887-201ENSMUST00000192752 2716 ntBASIC4.02□□□□□ -1.77
Trim40Q3UWA4 AC153959.1-201ENSMUST00000213617 1694 ntBASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Gm27013-202ENSMUST00000205067 1436 ntBASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Trim40Q3UWA4 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Trim40Q3UWA4 Gm3623-201ENSMUST00000173643 2747 ntBASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Gm29325-201ENSMUST00000190705 2528 ntBASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Gm12586-201ENSMUST00000117328 1316 ntBASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
Trim40Q3UWA4 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trim40Q3UWA4 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Gm44288-201ENSMUST00000205061 2795 ntBASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Gm44224-201ENSMUST00000204131 1463 ntBASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Gm25919-201ENSMUST00000104271 132 ntBASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Gm13890-201ENSMUST00000117578 390 ntBASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Gm15001-201ENSMUST00000117657 795 ntBASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Gm13213-201ENSMUST00000119668 474 ntBASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Gm25109-201ENSMUST00000122474 114 ntBASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Gm12226-201ENSMUST00000144172 876 ntBASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Gm25824-201ENSMUST00000157092 121 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms