Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Col17a1Q07563 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Col17a1Q07563 Gm37033-201ENSMUST00000193199 7350 ntBASIC6.96□□□□□ -1.29
Col17a1Q07563 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
Col17a1Q07563 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC6.96□□□□□ -1.29
Col17a1Q07563 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
Col17a1Q07563 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.29
Col17a1Q07563 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
Col17a1Q07563 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col17a1Q07563 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col17a1Q07563 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Col17a1Q07563 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Col17a1Q07563 Gm26300-201ENSMUST00000102282 94 ntBASIC6.96□□□□□ -1.3
Col17a1Q07563 Snord70-201ENSMUST00000104157 87 ntBASIC6.96□□□□□ -1.3
Col17a1Q07563 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Col17a1Q07563 Gm13195-201ENSMUST00000117229 261 ntBASIC6.96□□□□□ -1.3
Col17a1Q07563 Gm14624-201ENSMUST00000117746 192 ntBASIC6.96□□□□□ -1.3
Col17a1Q07563 Gm13454-201ENSMUST00000118166 483 ntBASIC6.96□□□□□ -1.3
Col17a1Q07563 Gm23116-201ENSMUST00000158481 67 ntBASIC6.96□□□□□ -1.3
Col17a1Q07563 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Col17a1Q07563 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Col17a1Q07563 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Col17a1Q07563 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Col17a1Q07563 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC6.96□□□□□ -1.3
Col17a1Q07563 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Col17a1Q07563 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC6.96□□□□□ -1.3
Col17a1Q07563 Mir7k-201ENSMUST00000184115 110 ntBASIC6.96□□□□□ -1.3
Col17a1Q07563 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Col17a1Q07563 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC6.96□□□□□ -1.3
Col17a1Q07563 Mir1892-201ENSMUST00000197752 80 ntBASIC6.96□□□□□ -1.3
Col17a1Q07563 Gm44988-201ENSMUST00000203835 1161 ntBASIC6.96□□□□□ -1.3
Col17a1Q07563 Gm6064-201ENSMUST00000203999 454 ntBASIC6.96□□□□□ -1.3
Col17a1Q07563 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Col17a1Q07563 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Col17a1Q07563 AC124586.1-201ENSMUST00000221673 2795 ntBASIC6.96□□□□□ -1.3
Col17a1Q07563 Gm43654-201ENSMUST00000200664 3417 ntBASIC6.96□□□□□ -1.3
Col17a1Q07563 Gm14886-201ENSMUST00000117208 2629 ntBASIC6.96□□□□□ -1.3
Col17a1Q07563 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col17a1Q07563 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Col17a1Q07563 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col17a1Q07563 Gm12719-201ENSMUST00000118859 241 ntBASIC6.95□□□□□ -1.3
Col17a1Q07563 Mup-ps1-201ENSMUST00000120720 544 ntBASIC6.95□□□□□ -1.3
Col17a1Q07563 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC6.95□□□□□ -1.3
Col17a1Q07563 Gm12276-201ENSMUST00000121709 301 ntBASIC6.95□□□□□ -1.3
Col17a1Q07563 Gm24850-201ENSMUST00000158029 119 ntBASIC6.95□□□□□ -1.3
Col17a1Q07563 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC6.95□□□□□ -1.3
Col17a1Q07563 Gm38279-201ENSMUST00000194067 1131 ntBASIC6.95□□□□□ -1.3
Col17a1Q07563 Gm32381-201ENSMUST00000203192 476 ntBASIC6.95□□□□□ -1.3
Col17a1Q07563 Gm45553-201ENSMUST00000209929 507 ntBASIC6.95□□□□□ -1.3
Col17a1Q07563 AC130823.2-201ENSMUST00000226169 290 ntBASIC6.95□□□□□ -1.3
Col17a1Q07563 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Col17a1Q07563 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Col17a1Q07563 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Col17a1Q07563 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col17a1Q07563 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC6.95□□□□□ -1.3
Col17a1Q07563 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Col17a1Q07563 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col17a1Q07563 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC6.95□□□□□ -1.3
Col17a1Q07563 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC6.95□□□□□ -1.3
Col17a1Q07563 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC6.94□□□□□ -1.3
Col17a1Q07563 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col17a1Q07563 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col17a1Q07563 Gm11200-201ENSMUST00000121698 448 ntBASIC6.94□□□□□ -1.3
Col17a1Q07563 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC6.94□□□□□ -1.3
Col17a1Q07563 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col17a1Q07563 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC6.94□□□□□ -1.3
Col17a1Q07563 Gm23084-201ENSMUST00000157850 114 ntBASIC6.94□□□□□ -1.3
Col17a1Q07563 Gm3123-201ENSMUST00000163480 480 ntBASIC6.94□□□□□ -1.3
Col17a1Q07563 Gm9890-201ENSMUST00000171867 537 ntBASIC6.94□□□□□ -1.3
Col17a1Q07563 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Col17a1Q07563 Mir7676-1-201ENSMUST00000183491 62 ntBASIC6.94□□□□□ -1.3
Col17a1Q07563 Mir7676-2-201ENSMUST00000183523 62 ntBASIC6.94□□□□□ -1.3
Col17a1Q07563 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col17a1Q07563 Gm37492-201ENSMUST00000191948 376 ntBASIC6.94□□□□□ -1.3
Col17a1Q07563 Gm42593-201ENSMUST00000198469 377 ntBASIC6.94□□□□□ -1.3
Col17a1Q07563 Gm42625-201ENSMUST00000198611 922 ntBASIC6.94□□□□□ -1.3
Col17a1Q07563 Gm44463-201ENSMUST00000198895 137 ntBASIC6.94□□□□□ -1.3
Col17a1Q07563 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC6.94□□□□□ -1.3
Col17a1Q07563 Gm2522-201ENSMUST00000204280 322 ntBASIC6.94□□□□□ -1.3
Col17a1Q07563 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC6.94□□□□□ -1.3
Col17a1Q07563 Gm45080-201ENSMUST00000206648 283 ntBASIC6.94□□□□□ -1.3
Col17a1Q07563 Gm44513-201ENSMUST00000206811 439 ntBASIC6.94□□□□□ -1.3
Col17a1Q07563 Gm44869-201ENSMUST00000208836 357 ntBASIC6.94□□□□□ -1.3
Col17a1Q07563 Gm18193-201ENSMUST00000210017 772 ntBASIC6.94□□□□□ -1.3
Col17a1Q07563 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Col17a1Q07563 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Col17a1Q07563 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC6.94□□□□□ -1.3
Col17a1Q07563 AC125523.1-201ENSMUST00000228018 934 ntBASIC6.94□□□□□ -1.3
Col17a1Q07563 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col17a1Q07563 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC6.94□□□□□ -1.3
Col17a1Q07563 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Col17a1Q07563 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col17a1Q07563 Gm8724-201ENSMUST00000081668 483 ntBASIC6.94□□□□□ -1.3
Col17a1Q07563 Gm45884-201ENSMUST00000209540 3416 ntBASIC6.94□□□□□ -1.3
Col17a1Q07563 CT025710.1-201ENSMUST00000222949 2533 ntBASIC6.94□□□□□ -1.3
Col17a1Q07563 Gm37212-201ENSMUST00000192582 3650 ntBASIC6.94□□□□□ -1.3
Col17a1Q07563 Gm27013-202ENSMUST00000205067 1436 ntBASIC6.94□□□□□ -1.3
Col17a1Q07563 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col17a1Q07563 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC6.94□□□□□ -1.3
Col17a1Q07563 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms