Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a1Q04857 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Col6a1Q04857 Gm22657-201ENSMUST00000104197 132 ntBASIC6.07□□□□□ -1.44
Col6a1Q04857 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Col6a1Q04857 Gm15399-201ENSMUST00000118055 724 ntBASIC6.07□□□□□ -1.44
Col6a1Q04857 Gm13349-201ENSMUST00000118436 411 ntBASIC6.07□□□□□ -1.44
Col6a1Q04857 Gm23211-201ENSMUST00000122717 308 ntBASIC6.07□□□□□ -1.44
Col6a1Q04857 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC6.07□□□□□ -1.44
Col6a1Q04857 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC6.07□□□□□ -1.44
Col6a1Q04857 Gm24847-201ENSMUST00000158032 108 ntBASIC6.07□□□□□ -1.44
Col6a1Q04857 Gm16101-201ENSMUST00000160695 430 ntBASIC6.07□□□□□ -1.44
Col6a1Q04857 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC6.07□□□□□ -1.44
Col6a1Q04857 Gm25874-201ENSMUST00000178030 79 ntBASIC6.07□□□□□ -1.44
Col6a1Q04857 Mir7012-201ENSMUST00000183900 64 ntBASIC6.07□□□□□ -1.44
Col6a1Q04857 Gm28967-201ENSMUST00000187351 281 ntBASIC6.07□□□□□ -1.44
Col6a1Q04857 Gm9227-201ENSMUST00000194733 566 ntBASIC6.07□□□□□ -1.44
Col6a1Q04857 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC6.07□□□□□ -1.44
Col6a1Q04857 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC6.07□□□□□ -1.44
Col6a1Q04857 Gm44149-201ENSMUST00000204256 226 ntBASIC6.07□□□□□ -1.44
Col6a1Q04857 Gm6929-201ENSMUST00000210930 468 ntBASIC6.07□□□□□ -1.44
Col6a1Q04857 Gm7530-201ENSMUST00000218466 605 ntBASIC6.07□□□□□ -1.44
Col6a1Q04857 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a1Q04857 AC153924.1-201ENSMUST00000220117 312 ntBASIC6.07□□□□□ -1.44
Col6a1Q04857 AC125405.1-201ENSMUST00000226406 589 ntBASIC6.07□□□□□ -1.44
Col6a1Q04857 AC163646.2-201ENSMUST00000227962 141 ntBASIC6.07□□□□□ -1.44
Col6a1Q04857 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a1Q04857 Gm4963-201ENSMUST00000072718 378 ntBASIC6.07□□□□□ -1.44
Col6a1Q04857 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC6.07□□□□□ -1.44
Col6a1Q04857 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a1Q04857 Gm13340-201ENSMUST00000117219 1545 ntBASIC6.07□□□□□ -1.44
Col6a1Q04857 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Col6a1Q04857 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Col6a1Q04857 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Col6a1Q04857 Gm37880-201ENSMUST00000192216 3257 ntBASIC6.07□□□□□ -1.44
Col6a1Q04857 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a1Q04857 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Col6a1Q04857 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a1Q04857 Gm26814-201ENSMUST00000181178 4149 ntBASIC6.06□□□□□ -1.44
Col6a1Q04857 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a1Q04857 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Col6a1Q04857 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a1Q04857 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a1Q04857 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC6.06□□□□□ -1.44
Col6a1Q04857 Gm13491-201ENSMUST00000118267 235 ntBASIC6.06□□□□□ -1.44
Col6a1Q04857 Gm13435-201ENSMUST00000120111 1023 ntBASIC6.06□□□□□ -1.44
Col6a1Q04857 Gm15014-201ENSMUST00000120742 258 ntBASIC6.06□□□□□ -1.44
Col6a1Q04857 Gm12007-201ENSMUST00000120978 597 ntBASIC6.06□□□□□ -1.44
Col6a1Q04857 Mir1947-201ENSMUST00000158235 85 ntBASIC6.06□□□□□ -1.44
Col6a1Q04857 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC6.06□□□□□ -1.44
Col6a1Q04857 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC6.06□□□□□ -1.44
Col6a1Q04857 Gm28404-201ENSMUST00000190242 453 ntBASIC6.06□□□□□ -1.44
Col6a1Q04857 Gm37715-201ENSMUST00000193206 235 ntBASIC6.06□□□□□ -1.44
Col6a1Q04857 Gm42776-201ENSMUST00000198031 406 ntBASIC6.06□□□□□ -1.44
Col6a1Q04857 Mir409-201ENSMUST00000198153 79 ntBASIC6.06□□□□□ -1.44
Col6a1Q04857 Gm8041-201ENSMUST00000199755 616 ntBASIC6.06□□□□□ -1.44
Col6a1Q04857 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC6.06□□□□□ -1.44
Col6a1Q04857 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC6.06□□□□□ -1.44
Col6a1Q04857 Gm2607-201ENSMUST00000212389 627 ntBASIC6.06□□□□□ -1.44
Col6a1Q04857 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC6.06□□□□□ -1.44
Col6a1Q04857 Gm5176-202ENSMUST00000220267 583 ntBASIC6.06□□□□□ -1.44
Col6a1Q04857 AC144628.2-201ENSMUST00000227374 352 ntBASIC6.06□□□□□ -1.44
Col6a1Q04857 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Col6a1Q04857 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a1Q04857 Gm23686-201ENSMUST00000083241 164 ntBASIC6.06□□□□□ -1.44
Col6a1Q04857 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a1Q04857 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a1Q04857 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a1Q04857 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a1Q04857 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a1Q04857 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC6.06□□□□□ -1.44
Col6a1Q04857 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Col6a1Q04857 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC6.06□□□□□ -1.44
Col6a1Q04857 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Col6a1Q04857 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Col6a1Q04857 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a1Q04857 Gm38243-201ENSMUST00000194737 1567 ntBASIC6.06□□□□□ -1.44
Col6a1Q04857 Gm6215-201ENSMUST00000119297 1386 ntBASIC6.06□□□□□ -1.44
Col6a1Q04857 Gm7905-201ENSMUST00000119933 1386 ntBASIC6.06□□□□□ -1.44
Col6a1Q04857 Gm6207-201ENSMUST00000120075 1386 ntBASIC6.06□□□□□ -1.44
Col6a1Q04857 Gm6228-201ENSMUST00000178856 1386 ntBASIC6.06□□□□□ -1.44
Col6a1Q04857 Gm6221-201ENSMUST00000180064 1386 ntBASIC6.06□□□□□ -1.44
Col6a1Q04857 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Col6a1Q04857 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
Col6a1Q04857 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a1Q04857 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a1Q04857 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a1Q04857 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a1Q04857 AC174797.3-203ENSMUST00000225749 2078 ntBASIC6.05□□□□□ -1.44
Col6a1Q04857 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a1Q04857 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a1Q04857 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC6.05□□□□□ -1.44
Col6a1Q04857 Gm42531-201ENSMUST00000201648 4048 ntBASIC6.05□□□□□ -1.44
Col6a1Q04857 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Col6a1Q04857 Gm24125-201ENSMUST00000104105 137 ntBASIC6.05□□□□□ -1.44
Col6a1Q04857 Gm24469-201ENSMUST00000104487 131 ntBASIC6.05□□□□□ -1.44
Col6a1Q04857 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a1Q04857 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Col6a1Q04857 Gm13311-201ENSMUST00000117863 379 ntBASIC6.05□□□□□ -1.44
Col6a1Q04857 Gm13170-201ENSMUST00000119716 643 ntBASIC6.05□□□□□ -1.44
Col6a1Q04857 Gm12515-201ENSMUST00000120116 361 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms