Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm25605-201ENSMUST00000158364 124 ntBASIC4.8□□□□□ -1.64
Col8a1Q00780 Fth-ps2-201ENSMUST00000168364 516 ntBASIC4.8□□□□□ -1.64
Col8a1Q00780 Gm3242-201ENSMUST00000171273 485 ntBASIC4.8□□□□□ -1.64
Col8a1Q00780 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Col8a1Q00780 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC4.8□□□□□ -1.64
Col8a1Q00780 Mir3104-201ENSMUST00000174911 63 ntBASIC4.8□□□□□ -1.64
Col8a1Q00780 Gm20673-201ENSMUST00000177167 430 ntBASIC4.8□□□□□ -1.64
Col8a1Q00780 Gm25874-201ENSMUST00000178030 79 ntBASIC4.8□□□□□ -1.64
Col8a1Q00780 Mir6541-201ENSMUST00000183649 110 ntBASIC4.8□□□□□ -1.64
Col8a1Q00780 Mir6400-201ENSMUST00000184870 92 ntBASIC4.8□□□□□ -1.64
Col8a1Q00780 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC4.8□□□□□ -1.64
Col8a1Q00780 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Col8a1Q00780 Gm37421-201ENSMUST00000193088 132 ntBASIC4.8□□□□□ -1.64
Col8a1Q00780 Gm44295-201ENSMUST00000203805 437 ntBASIC4.8□□□□□ -1.64
Col8a1Q00780 Gm9278-201ENSMUST00000205508 553 ntBASIC4.8□□□□□ -1.64
Col8a1Q00780 Gm18468-201ENSMUST00000207321 369 ntBASIC4.8□□□□□ -1.64
Col8a1Q00780 Gm18470-201ENSMUST00000207467 420 ntBASIC4.8□□□□□ -1.64
Col8a1Q00780 Gm18465-201ENSMUST00000207468 369 ntBASIC4.8□□□□□ -1.64
Col8a1Q00780 Gm18464-201ENSMUST00000207803 420 ntBASIC4.8□□□□□ -1.64
Col8a1Q00780 Gm45232-201ENSMUST00000207811 162 ntBASIC4.8□□□□□ -1.64
Col8a1Q00780 Gm18458-201ENSMUST00000207908 369 ntBASIC4.8□□□□□ -1.64
Col8a1Q00780 Gm18461-201ENSMUST00000208421 420 ntBASIC4.8□□□□□ -1.64
Col8a1Q00780 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC4.8□□□□□ -1.64
Col8a1Q00780 Gm45375-201ENSMUST00000210338 280 ntBASIC4.8□□□□□ -1.64
Col8a1Q00780 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC4.8□□□□□ -1.64
Col8a1Q00780 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC4.8□□□□□ -1.64
Col8a1Q00780 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC4.8□□□□□ -1.64
Col8a1Q00780 AC238676.3-201ENSMUST00000223042 154 ntBASIC4.8□□□□□ -1.64
Col8a1Q00780 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC4.8□□□□□ -1.64
Col8a1Q00780 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
Col8a1Q00780 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Col8a1Q00780 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col8a1Q00780 Gm23404-201ENSMUST00000082543 97 ntBASIC4.8□□□□□ -1.64
Col8a1Q00780 Mir325-201ENSMUST00000083491 98 ntBASIC4.8□□□□□ -1.64
Col8a1Q00780 Gm25859-201ENSMUST00000083710 91 ntBASIC4.8□□□□□ -1.64
Col8a1Q00780 Gm43637-201ENSMUST00000202206 2926 ntBASIC4.8□□□□□ -1.64
Col8a1Q00780 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Col8a1Q00780 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col8a1Q00780 Gm38126-201ENSMUST00000195297 4003 ntBASIC4.8□□□□□ -1.64
Col8a1Q00780 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col8a1Q00780 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Col8a1Q00780 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC4.8□□□□□ -1.64
Col8a1Q00780 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col8a1Q00780 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Col8a1Q00780 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col8a1Q00780 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col8a1Q00780 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col8a1Q00780 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
Col8a1Q00780 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col8a1Q00780 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Col8a1Q00780 Gm44220-201ENSMUST00000203784 2487 ntBASIC4.79□□□□□ -1.64
Col8a1Q00780 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC4.79□□□□□ -1.64
Col8a1Q00780 Gm14385-201ENSMUST00000116315 876 ntBASIC4.79□□□□□ -1.64
Col8a1Q00780 Gm14575-201ENSMUST00000117210 560 ntBASIC4.79□□□□□ -1.64
Col8a1Q00780 Gm13439-201ENSMUST00000117541 409 ntBASIC4.79□□□□□ -1.64
Col8a1Q00780 Gm12186-201ENSMUST00000119050 945 ntBASIC4.79□□□□□ -1.64
Col8a1Q00780 Gm12891-201ENSMUST00000119358 240 ntBASIC4.79□□□□□ -1.64
Col8a1Q00780 Gm23792-201ENSMUST00000122557 93 ntBASIC4.79□□□□□ -1.64
Col8a1Q00780 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC4.79□□□□□ -1.64
Col8a1Q00780 Mup-ps2-201ENSMUST00000142602 533 ntBASIC4.79□□□□□ -1.64
Col8a1Q00780 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Col8a1Q00780 Gm22216-201ENSMUST00000157557 114 ntBASIC4.79□□□□□ -1.64
Col8a1Q00780 Gm23501-201ENSMUST00000157744 256 ntBASIC4.79□□□□□ -1.64
Col8a1Q00780 Gm25185-201ENSMUST00000157754 96 ntBASIC4.79□□□□□ -1.64
Col8a1Q00780 Gm15974-201ENSMUST00000159103 531 ntBASIC4.79□□□□□ -1.64
Col8a1Q00780 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC4.79□□□□□ -1.64
Col8a1Q00780 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC4.79□□□□□ -1.64
Col8a1Q00780 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Col8a1Q00780 Gm17929-201ENSMUST00000186851 627 ntBASIC4.79□□□□□ -1.64
Col8a1Q00780 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Col8a1Q00780 Gm5734-201ENSMUST00000189787 913 ntBASIC4.79□□□□□ -1.64
Col8a1Q00780 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC4.79□□□□□ -1.64
Col8a1Q00780 Gm38234-201ENSMUST00000195204 421 ntBASIC4.79□□□□□ -1.64
Col8a1Q00780 Gm5983-201ENSMUST00000197739 770 ntBASIC4.79□□□□□ -1.64
Col8a1Q00780 Gm33952-201ENSMUST00000197795 408 ntBASIC4.79□□□□□ -1.64
Col8a1Q00780 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC4.79□□□□□ -1.64
Col8a1Q00780 Gm44923-201ENSMUST00000206673 85 ntBASIC4.79□□□□□ -1.64
Col8a1Q00780 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC4.79□□□□□ -1.64
Col8a1Q00780 Gm8106-201ENSMUST00000213123 523 ntBASIC4.79□□□□□ -1.64
Col8a1Q00780 AC153505.2-201ENSMUST00000217741 277 ntBASIC4.79□□□□□ -1.64
Col8a1Q00780 AC153924.1-201ENSMUST00000220117 312 ntBASIC4.79□□□□□ -1.64
Col8a1Q00780 AC124732.4-201ENSMUST00000220930 1274 ntBASIC4.79□□□□□ -1.64
Col8a1Q00780 AC124433.2-201ENSMUST00000223867 291 ntBASIC4.79□□□□□ -1.64
Col8a1Q00780 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Col8a1Q00780 AC133101.1-201ENSMUST00000226939 1199 ntBASIC4.79□□□□□ -1.64
Col8a1Q00780 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col8a1Q00780 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Col8a1Q00780 Gm23093-201ENSMUST00000083450 102 ntBASIC4.79□□□□□ -1.64
Col8a1Q00780 Mir17-201ENSMUST00000083574 84 ntBASIC4.79□□□□□ -1.64
Col8a1Q00780 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Col8a1Q00780 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Col8a1Q00780 Gm44697-201ENSMUST00000207756 1679 ntBASIC4.79□□□□□ -1.64
Col8a1Q00780 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col8a1Q00780 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col8a1Q00780 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Col8a1Q00780 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col8a1Q00780 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col8a1Q00780 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Col8a1Q00780 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col8a1Q00780 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms