Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC3.51□□□□□ -1.85
Nkx3-1P97436 Gm22398-201ENSMUST00000174941 125 ntBASIC3.51□□□□□ -1.85
Nkx3-1P97436 Gm23365-201ENSMUST00000175019 125 ntBASIC3.51□□□□□ -1.85
Nkx3-1P97436 Gm25960-201ENSMUST00000175110 125 ntBASIC3.51□□□□□ -1.85
Nkx3-1P97436 Gm44453-201ENSMUST00000175161 126 ntBASIC3.51□□□□□ -1.85
Nkx3-1P97436 Gm25731-201ENSMUST00000175167 125 ntBASIC3.51□□□□□ -1.85
Nkx3-1P97436 Gm22120-201ENSMUST00000175590 70 ntBASIC3.51□□□□□ -1.85
Nkx3-1P97436 Gm25195-201ENSMUST00000177656 126 ntBASIC3.51□□□□□ -1.85
Nkx3-1P97436 Gm10067-201ENSMUST00000179462 348 ntBASIC3.51□□□□□ -1.85
Nkx3-1P97436 Gm5368-201ENSMUST00000189012 589 ntBASIC3.51□□□□□ -1.85
Nkx3-1P97436 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC3.51□□□□□ -1.85
Nkx3-1P97436 Gm43730-201ENSMUST00000199863 372 ntBASIC3.51□□□□□ -1.85
Nkx3-1P97436 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC3.51□□□□□ -1.85
Nkx3-1P97436 Gm19908-201ENSMUST00000204684 391 ntBASIC3.51□□□□□ -1.85
Nkx3-1P97436 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC3.51□□□□□ -1.85
Nkx3-1P97436 CT009754.4-201ENSMUST00000221430 565 ntBASIC3.51□□□□□ -1.85
Nkx3-1P97436 CT009713.4-201ENSMUST00000224246 272 ntBASIC3.51□□□□□ -1.85
Nkx3-1P97436 CU024892.1-201ENSMUST00000224869 515 ntBASIC3.51□□□□□ -1.85
Nkx3-1P97436 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.51□□□□□ -1.85
Nkx3-1P97436 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Nkx3-1P97436 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Nkx3-1P97436 Gm8744-201ENSMUST00000204475 3581 ntBASIC3.51□□□□□ -1.85
Nkx3-1P97436 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC3.51□□□□□ -1.85
Nkx3-1P97436 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
Nkx3-1P97436 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Nkx3-1P97436 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Nkx3-1P97436 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Nkx3-1P97436 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC3.51□□□□□ -1.85
Nkx3-1P97436 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Nkx3-1P97436 Gm37862-201ENSMUST00000193079 2533 ntBASIC3.5□□□□□ -1.85
Nkx3-1P97436 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
Nkx3-1P97436 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Nkx3-1P97436 Gm11432-201ENSMUST00000117334 231 ntBASIC3.5□□□□□ -1.85
Nkx3-1P97436 Gm14564-201ENSMUST00000122159 294 ntBASIC3.5□□□□□ -1.85
Nkx3-1P97436 n-R5s45-201ENSMUST00000122592 110 ntBASIC3.5□□□□□ -1.85
Nkx3-1P97436 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC3.5□□□□□ -1.85
Nkx3-1P97436 Gm4222-201ENSMUST00000165784 470 ntBASIC3.5□□□□□ -1.85
Nkx3-1P97436 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
Nkx3-1P97436 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
Nkx3-1P97436 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Nkx3-1P97436 Gm17777-201ENSMUST00000189740 1276 ntBASIC3.5□□□□□ -1.85
Nkx3-1P97436 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Nkx3-1P97436 Gm4644-201ENSMUST00000197587 400 ntBASIC3.5□□□□□ -1.85
Nkx3-1P97436 Gm43814-201ENSMUST00000197851 413 ntBASIC3.5□□□□□ -1.85
Nkx3-1P97436 Gm43941-201ENSMUST00000203303 1073 ntBASIC3.5□□□□□ -1.85
Nkx3-1P97436 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC3.5□□□□□ -1.85
Nkx3-1P97436 Gm45006-201ENSMUST00000206078 690 ntBASIC3.5□□□□□ -1.85
Nkx3-1P97436 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.5□□□□□ -1.85
Nkx3-1P97436 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Nkx3-1P97436 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.5□□□□□ -1.85
Nkx3-1P97436 Gm4036-201ENSMUST00000220842 626 ntBASIC3.5□□□□□ -1.85
Nkx3-1P97436 AC154419.1-201ENSMUST00000227627 272 ntBASIC3.5□□□□□ -1.85
Nkx3-1P97436 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC3.5□□□□□ -1.85
Nkx3-1P97436 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Nkx3-1P97436 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Nkx3-1P97436 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Nkx3-1P97436 BC055308-201ENSMUST00000193380 2538 ntBASIC3.5□□□□□ -1.85
Nkx3-1P97436 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Nkx3-1P97436 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Nkx3-1P97436 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Nkx3-1P97436 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
Nkx3-1P97436 Gm14667-201ENSMUST00000119448 1350 ntBASIC3.5□□□□□ -1.85
Nkx3-1P97436 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Nkx3-1P97436 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Nkx3-1P97436 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Nkx3-1P97436 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Nkx3-1P97436 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Nkx3-1P97436 Gm24608-201ENSMUST00000104381 136 ntBASIC3.49□□□□□ -1.85
Nkx3-1P97436 Gm13268-201ENSMUST00000117485 433 ntBASIC3.49□□□□□ -1.85
Nkx3-1P97436 Gm12335-201ENSMUST00000119738 327 ntBASIC3.49□□□□□ -1.85
Nkx3-1P97436 Gm7618-201ENSMUST00000121643 171 ntBASIC3.49□□□□□ -1.85
Nkx3-1P97436 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC3.49□□□□□ -1.85
Nkx3-1P97436 Gm26148-201ENSMUST00000157430 68 ntBASIC3.49□□□□□ -1.85
Nkx3-1P97436 Gm22084-201ENSMUST00000157585 105 ntBASIC3.49□□□□□ -1.85
Nkx3-1P97436 Gm22889-201ENSMUST00000158639 58 ntBASIC3.49□□□□□ -1.85
Nkx3-1P97436 Gm7241-201ENSMUST00000159853 357 ntBASIC3.49□□□□□ -1.85
Nkx3-1P97436 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Nkx3-1P97436 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Nkx3-1P97436 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Nkx3-1P97436 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC3.49□□□□□ -1.85
Nkx3-1P97436 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Nkx3-1P97436 Gm27762-201ENSMUST00000183417 109 ntBASIC3.49□□□□□ -1.85
Nkx3-1P97436 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC3.49□□□□□ -1.85
Nkx3-1P97436 Gm37837-201ENSMUST00000191743 604 ntBASIC3.49□□□□□ -1.85
Nkx3-1P97436 Gm42983-201ENSMUST00000199879 815 ntBASIC3.49□□□□□ -1.85
Nkx3-1P97436 Gm8035-201ENSMUST00000204625 687 ntBASIC3.49□□□□□ -1.85
Nkx3-1P97436 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Nkx3-1P97436 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC3.49□□□□□ -1.85
Nkx3-1P97436 Gm7786-201ENSMUST00000210494 436 ntBASIC3.49□□□□□ -1.85
Nkx3-1P97436 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC3.49□□□□□ -1.85
Nkx3-1P97436 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Nkx3-1P97436 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC3.49□□□□□ -1.85
Nkx3-1P97436 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Nkx3-1P97436 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC3.49□□□□□ -1.85
Nkx3-1P97436 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3.49□□□□□ -1.85
Nkx3-1P97436 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Nkx3-1P97436 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Nkx3-1P97436 Gm5155-201ENSMUST00000072381 2841 ntBASIC3.49□□□□□ -1.85
Nkx3-1P97436 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Nkx3-1P97436 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms