Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 CT030184.1-201ENSMUST00000222393 416 ntBASIC5.83□□□□□ -1.48
Sox1P53783 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sox1P53783 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Sox1P53783 Gm25699-201ENSMUST00000082896 167 ntBASIC5.83□□□□□ -1.48
Sox1P53783 Gm26206-201ENSMUST00000082908 110 ntBASIC5.83□□□□□ -1.48
Sox1P53783 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC5.83□□□□□ -1.48
Sox1P53783 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Sox1P53783 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sox1P53783 Gm42989-201ENSMUST00000200646 2306 ntBASIC5.83□□□□□ -1.48
Sox1P53783 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sox1P53783 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Sox1P53783 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC5.83□□□□□ -1.48
Sox1P53783 AC130217.2-201ENSMUST00000224009 2990 ntBASIC5.83□□□□□ -1.48
Sox1P53783 Gm8675-201ENSMUST00000201408 1856 ntBASIC5.83□□□□□ -1.48
Sox1P53783 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sox1P53783 Gm37106-201ENSMUST00000193760 1532 ntBASIC5.83□□□□□ -1.48
Sox1P53783 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Sox1P53783 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Sox1P53783 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sox1P53783 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC5.83□□□□□ -1.48
Sox1P53783 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sox1P53783 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.83□□□□□ -1.48
Sox1P53783 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC5.82□□□□□ -1.48
Sox1P53783 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sox1P53783 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sox1P53783 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Sox1P53783 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sox1P53783 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sox1P53783 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sox1P53783 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.82□□□□□ -1.48
Sox1P53783 Gm11268-201ENSMUST00000118347 267 ntBASIC5.82□□□□□ -1.48
Sox1P53783 Gm4234-201ENSMUST00000119747 714 ntBASIC5.82□□□□□ -1.48
Sox1P53783 Gm25808-201ENSMUST00000122784 284 ntBASIC5.82□□□□□ -1.48
Sox1P53783 Gm7846-201ENSMUST00000145844 274 ntBASIC5.82□□□□□ -1.48
Sox1P53783 Gm22216-201ENSMUST00000157557 114 ntBASIC5.82□□□□□ -1.48
Sox1P53783 Gm25430-201ENSMUST00000157614 289 ntBASIC5.82□□□□□ -1.48
Sox1P53783 Gm22916-201ENSMUST00000157616 119 ntBASIC5.82□□□□□ -1.48
Sox1P53783 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC5.82□□□□□ -1.48
Sox1P53783 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC5.82□□□□□ -1.48
Sox1P53783 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC5.82□□□□□ -1.48
Sox1P53783 Gm20673-201ENSMUST00000177167 430 ntBASIC5.82□□□□□ -1.48
Sox1P53783 Gm28666-201ENSMUST00000186649 274 ntBASIC5.82□□□□□ -1.48
Sox1P53783 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Sox1P53783 Gm43510-201ENSMUST00000197922 353 ntBASIC5.82□□□□□ -1.48
Sox1P53783 Igkv11-114-201ENSMUST00000200013 346 ntBASIC5.82□□□□□ -1.48
Sox1P53783 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC5.82□□□□□ -1.48
Sox1P53783 Gm29754-201ENSMUST00000206269 358 ntBASIC5.82□□□□□ -1.48
Sox1P53783 Gm45588-201ENSMUST00000211213 630 ntBASIC5.82□□□□□ -1.48
Sox1P53783 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC5.82□□□□□ -1.48
Sox1P53783 Gm46996-201ENSMUST00000220924 408 ntBASIC5.82□□□□□ -1.48
Sox1P53783 AC117588.3-201ENSMUST00000228517 325 ntBASIC5.82□□□□□ -1.48
Sox1P53783 AC126690.1-201ENSMUST00000228898 397 ntBASIC5.82□□□□□ -1.48
Sox1P53783 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Sox1P53783 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sox1P53783 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC5.82□□□□□ -1.48
Sox1P53783 Gm25141-201ENSMUST00000083177 107 ntBASIC5.82□□□□□ -1.48
Sox1P53783 Gm23503-201ENSMUST00000083903 107 ntBASIC5.82□□□□□ -1.48
Sox1P53783 Gm23795-201ENSMUST00000084006 137 ntBASIC5.82□□□□□ -1.48
Sox1P53783 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Sox1P53783 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
Sox1P53783 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sox1P53783 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sox1P53783 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.82□□□□□ -1.48
Sox1P53783 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sox1P53783 Gm8980-201ENSMUST00000140232 2197 ntBASIC5.82□□□□□ -1.48
Sox1P53783 Gm28874-201ENSMUST00000190917 3134 ntBASIC5.81□□□□□ -1.48
Sox1P53783 AC107742.1-201ENSMUST00000227769 1390 ntBASIC5.81□□□□□ -1.48
Sox1P53783 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sox1P53783 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC5.81□□□□□ -1.48
Sox1P53783 Gm4541-201ENSMUST00000208901 1848 ntBASIC5.81□□□□□ -1.48
Sox1P53783 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Sox1P53783 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Sox1P53783 Gm44586-201ENSMUST00000207166 2737 ntBASIC5.81□□□□□ -1.48
Sox1P53783 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC5.81□□□□□ -1.48
Sox1P53783 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC5.81□□□□□ -1.48
Sox1P53783 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC5.81□□□□□ -1.48
Sox1P53783 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC5.81□□□□□ -1.48
Sox1P53783 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sox1P53783 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sox1P53783 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Sox1P53783 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Sox1P53783 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sox1P53783 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC5.81□□□□□ -1.48
Sox1P53783 Gm14046-201ENSMUST00000119389 509 ntBASIC5.81□□□□□ -1.48
Sox1P53783 Gm5942-201ENSMUST00000120046 439 ntBASIC5.81□□□□□ -1.48
Sox1P53783 Gm12876-201ENSMUST00000120975 408 ntBASIC5.81□□□□□ -1.48
Sox1P53783 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC5.81□□□□□ -1.48
Sox1P53783 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sox1P53783 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC5.81□□□□□ -1.48
Sox1P53783 Gm22765-201ENSMUST00000158371 128 ntBASIC5.81□□□□□ -1.48
Sox1P53783 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC5.81□□□□□ -1.48
Sox1P53783 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC5.81□□□□□ -1.48
Sox1P53783 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC5.81□□□□□ -1.48
Sox1P53783 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Sox1P53783 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sox1P53783 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sox1P53783 Gm36984-201ENSMUST00000192770 235 ntBASIC5.81□□□□□ -1.48
Sox1P53783 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC5.81□□□□□ -1.48
Sox1P53783 Gm42459-201ENSMUST00000199679 742 ntBASIC5.81□□□□□ -1.48
Sox1P53783 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms