Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Rfx1P48377 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Rfx1P48377 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC6.48□□□□□ -1.37
Rfx1P48377 Gm25088-201ENSMUST00000101803 79 ntBASIC6.48□□□□□ -1.37
Rfx1P48377 Gm22371-201ENSMUST00000104588 130 ntBASIC6.48□□□□□ -1.37
Rfx1P48377 Gm25315-201ENSMUST00000116823 121 ntBASIC6.48□□□□□ -1.37
Rfx1P48377 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC6.48□□□□□ -1.37
Rfx1P48377 Gm15177-201ENSMUST00000120491 577 ntBASIC6.48□□□□□ -1.37
Rfx1P48377 Gm15152-201ENSMUST00000121540 394 ntBASIC6.48□□□□□ -1.37
Rfx1P48377 Gm23430-201ENSMUST00000122490 314 ntBASIC6.48□□□□□ -1.37
Rfx1P48377 n-R5s24-201ENSMUST00000122518 117 ntBASIC6.48□□□□□ -1.37
Rfx1P48377 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC6.48□□□□□ -1.37
Rfx1P48377 Gm17421-201ENSMUST00000167845 674 ntBASIC6.48□□□□□ -1.37
Rfx1P48377 Gm17044-201ENSMUST00000168549 828 ntBASIC6.48□□□□□ -1.37
Rfx1P48377 Gm3170-201ENSMUST00000168753 850 ntBASIC6.48□□□□□ -1.37
Rfx1P48377 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC6.48□□□□□ -1.37
Rfx1P48377 Gm20620-201ENSMUST00000177528 168 ntBASIC6.48□□□□□ -1.37
Rfx1P48377 Gm3348-201ENSMUST00000177813 850 ntBASIC6.48□□□□□ -1.37
Rfx1P48377 Gm27905-201ENSMUST00000184005 207 ntBASIC6.48□□□□□ -1.37
Rfx1P48377 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC6.48□□□□□ -1.37
Rfx1P48377 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC6.48□□□□□ -1.37
Rfx1P48377 Gm43444-201ENSMUST00000198123 291 ntBASIC6.48□□□□□ -1.37
Rfx1P48377 AL669916.3-201ENSMUST00000213855 94 ntBASIC6.48□□□□□ -1.37
Rfx1P48377 AL669916.6-201ENSMUST00000214610 94 ntBASIC6.48□□□□□ -1.37
Rfx1P48377 AL669916.4-201ENSMUST00000215976 94 ntBASIC6.48□□□□□ -1.37
Rfx1P48377 AL669916.1-201ENSMUST00000217640 94 ntBASIC6.48□□□□□ -1.37
Rfx1P48377 AC158807.1-201ENSMUST00000217959 187 ntBASIC6.48□□□□□ -1.37
Rfx1P48377 AC160031.1-201ENSMUST00000219914 522 ntBASIC6.48□□□□□ -1.37
Rfx1P48377 AC116589.3-202ENSMUST00000221770 649 ntBASIC6.48□□□□□ -1.37
Rfx1P48377 AC116589.6-201ENSMUST00000222252 649 ntBASIC6.48□□□□□ -1.37
Rfx1P48377 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC6.48□□□□□ -1.37
Rfx1P48377 AC154636.1-201ENSMUST00000223226 126 ntBASIC6.48□□□□□ -1.37
Rfx1P48377 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Rfx1P48377 AC158142.2-201ENSMUST00000227892 635 ntBASIC6.48□□□□□ -1.37
Rfx1P48377 AC139350.4-201ENSMUST00000228483 798 ntBASIC6.48□□□□□ -1.37
Rfx1P48377 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Rfx1P48377 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Rfx1P48377 Gm23503-201ENSMUST00000083903 107 ntBASIC6.48□□□□□ -1.37
Rfx1P48377 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Rfx1P48377 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC6.48□□□□□ -1.37
Rfx1P48377 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Rfx1P48377 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Rfx1P48377 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Rfx1P48377 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Rfx1P48377 Gm43882-201ENSMUST00000204871 2264 ntBASIC6.48□□□□□ -1.37
Rfx1P48377 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
Rfx1P48377 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC6.48□□□□□ -1.37
Rfx1P48377 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Rfx1P48377 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Rfx1P48377 Gm43180-201ENSMUST00000197541 2886 ntBASIC6.47□□□□□ -1.37
Rfx1P48377 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rfx1P48377 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rfx1P48377 Gm42600-201ENSMUST00000202081 3588 ntBASIC6.47□□□□□ -1.37
Rfx1P48377 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
Rfx1P48377 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Rfx1P48377 Gm29488-201ENSMUST00000191427 2402 ntBASIC6.47□□□□□ -1.37
Rfx1P48377 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Rfx1P48377 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Rfx1P48377 Gm44801-201ENSMUST00000207644 2060 ntBASIC6.47□□□□□ -1.37
Rfx1P48377 Gm11409-201ENSMUST00000118621 403 ntBASIC6.47□□□□□ -1.37
Rfx1P48377 Gm13578-201ENSMUST00000120849 590 ntBASIC6.47□□□□□ -1.37
Rfx1P48377 Gm9225-201ENSMUST00000121921 836 ntBASIC6.47□□□□□ -1.37
Rfx1P48377 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC6.47□□□□□ -1.37
Rfx1P48377 Gm26354-201ENSMUST00000158221 129 ntBASIC6.47□□□□□ -1.37
Rfx1P48377 Gm23115-201ENSMUST00000158480 108 ntBASIC6.47□□□□□ -1.37
Rfx1P48377 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC6.47□□□□□ -1.37
Rfx1P48377 Gm27660-201ENSMUST00000184028 208 ntBASIC6.47□□□□□ -1.37
Rfx1P48377 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC6.47□□□□□ -1.37
Rfx1P48377 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC6.47□□□□□ -1.37
Rfx1P48377 Gm5116-201ENSMUST00000187732 463 ntBASIC6.47□□□□□ -1.37
Rfx1P48377 Gm29627-201ENSMUST00000187984 463 ntBASIC6.47□□□□□ -1.37
Rfx1P48377 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rfx1P48377 Gm37900-201ENSMUST00000195510 3805 ntBASIC6.47□□□□□ -1.37
Rfx1P48377 Gm44048-201ENSMUST00000204531 361 ntBASIC6.47□□□□□ -1.37
Rfx1P48377 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Rfx1P48377 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC6.47□□□□□ -1.37
Rfx1P48377 AC158633.1-201ENSMUST00000219892 649 ntBASIC6.47□□□□□ -1.37
Rfx1P48377 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Rfx1P48377 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rfx1P48377 Gm22351-201ENSMUST00000083925 107 ntBASIC6.47□□□□□ -1.37
Rfx1P48377 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Rfx1P48377 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rfx1P48377 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Rfx1P48377 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Rfx1P48377 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rfx1P48377 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Rfx1P48377 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rfx1P48377 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rfx1P48377 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rfx1P48377 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rfx1P48377 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Rfx1P48377 Smc5-206ENSMUST00000226111 3265 ntBASIC6.47□□□□□ -1.37
Rfx1P48377 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC6.47□□□□□ -1.37
Rfx1P48377 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Rfx1P48377 Gm37630-201ENSMUST00000194210 1456 ntBASIC6.47□□□□□ -1.37
Rfx1P48377 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Rfx1P48377 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Rfx1P48377 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Rfx1P48377 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Rfx1P48377 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC6.46□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms