Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Traf1P39428 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Traf1P39428 Gm5185-201ENSMUST00000080271 619 ntBASIC5.09□□□□□ -1.59
Traf1P39428 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Traf1P39428 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.6
Traf1P39428 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Traf1P39428 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
Traf1P39428 Gm28362-201ENSMUST00000189430 2420 ntBASIC5.08□□□□□ -1.6
Traf1P39428 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Traf1P39428 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Traf1P39428 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Traf1P39428 Neat1-201ENSMUST00000173672 20771 ntBASIC5.08□□□□□ -1.6
Traf1P39428 Gm15021-201ENSMUST00000117832 742 ntBASIC5.08□□□□□ -1.6
Traf1P39428 Gm13359-201ENSMUST00000119000 695 ntBASIC5.08□□□□□ -1.6
Traf1P39428 Gm12978-201ENSMUST00000121250 522 ntBASIC5.08□□□□□ -1.6
Traf1P39428 Gm12313-201ENSMUST00000121347 421 ntBASIC5.08□□□□□ -1.6
Traf1P39428 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
Traf1P39428 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC5.08□□□□□ -1.6
Traf1P39428 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Traf1P39428 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Traf1P39428 Gm5372-201ENSMUST00000187540 409 ntBASIC5.08□□□□□ -1.6
Traf1P39428 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC5.08□□□□□ -1.6
Traf1P39428 Gm5660-201ENSMUST00000197453 1149 ntBASIC5.08□□□□□ -1.6
Traf1P39428 Gm5885-202ENSMUST00000203357 528 ntBASIC5.08□□□□□ -1.6
Traf1P39428 Gm19237-201ENSMUST00000205036 1132 ntBASIC5.08□□□□□ -1.6
Traf1P39428 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC5.08□□□□□ -1.6
Traf1P39428 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC5.08□□□□□ -1.6
Traf1P39428 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC5.08□□□□□ -1.6
Traf1P39428 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Traf1P39428 AC159231.1-201ENSMUST00000225365 226 ntBASIC5.08□□□□□ -1.6
Traf1P39428 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Traf1P39428 Mir383-201ENSMUST00000083523 70 ntBASIC5.08□□□□□ -1.6
Traf1P39428 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Traf1P39428 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Traf1P39428 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
Traf1P39428 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Traf1P39428 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Traf1P39428 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Traf1P39428 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Traf1P39428 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
Traf1P39428 Igkv11-106-201ENSMUST00000103331 346 ntBASIC5.07□□□□□ -1.6
Traf1P39428 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Traf1P39428 Gm7834-201ENSMUST00000117560 437 ntBASIC5.07□□□□□ -1.6
Traf1P39428 Anp32-ps-201ENSMUST00000118265 388 ntBASIC5.07□□□□□ -1.6
Traf1P39428 Gm6062-201ENSMUST00000120462 631 ntBASIC5.07□□□□□ -1.6
Traf1P39428 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC5.07□□□□□ -1.6
Traf1P39428 Gm22211-201ENSMUST00000158097 156 ntBASIC5.07□□□□□ -1.6
Traf1P39428 Gm25971-201ENSMUST00000158953 286 ntBASIC5.07□□□□□ -1.6
Traf1P39428 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Traf1P39428 Gm3030-201ENSMUST00000163410 516 ntBASIC5.07□□□□□ -1.6
Traf1P39428 Gm3339-201ENSMUST00000163462 475 ntBASIC5.07□□□□□ -1.6
Traf1P39428 Gm6650-201ENSMUST00000166710 614 ntBASIC5.07□□□□□ -1.6
Traf1P39428 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Traf1P39428 Gm27896-201ENSMUST00000175162 317 ntBASIC5.07□□□□□ -1.6
Traf1P39428 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Traf1P39428 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC5.07□□□□□ -1.6
Traf1P39428 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Traf1P39428 Gm44852-201ENSMUST00000207950 369 ntBASIC5.07□□□□□ -1.6
Traf1P39428 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Traf1P39428 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC5.07□□□□□ -1.6
Traf1P39428 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Traf1P39428 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC5.07□□□□□ -1.6
Traf1P39428 CT573086.3-201ENSMUST00000228762 594 ntBASIC5.07□□□□□ -1.6
Traf1P39428 AC164437.2-201ENSMUST00000228915 797 ntBASIC5.07□□□□□ -1.6
Traf1P39428 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Traf1P39428 Gm22423-201ENSMUST00000082861 184 ntBASIC5.07□□□□□ -1.6
Traf1P39428 Gm26176-201ENSMUST00000083795 105 ntBASIC5.07□□□□□ -1.6
Traf1P39428 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Traf1P39428 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
Traf1P39428 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Traf1P39428 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Traf1P39428 Gm7988-201ENSMUST00000196623 2297 ntBASIC5.07□□□□□ -1.6
Traf1P39428 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Traf1P39428 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Traf1P39428 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Traf1P39428 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Traf1P39428 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC5.06□□□□□ -1.6
Traf1P39428 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Traf1P39428 Gm11698-201ENSMUST00000117948 455 ntBASIC5.06□□□□□ -1.6
Traf1P39428 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Traf1P39428 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC5.06□□□□□ -1.6
Traf1P39428 Gm11797-201ENSMUST00000121336 754 ntBASIC5.06□□□□□ -1.6
Traf1P39428 Gm14916-201ENSMUST00000121904 204 ntBASIC5.06□□□□□ -1.6
Traf1P39428 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Traf1P39428 Gm16359-201ENSMUST00000124511 289 ntBASIC5.06□□□□□ -1.6
Traf1P39428 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Traf1P39428 Gm25447-201ENSMUST00000158997 128 ntBASIC5.06□□□□□ -1.6
Traf1P39428 Gm16134-201ENSMUST00000161714 336 ntBASIC5.06□□□□□ -1.6
Traf1P39428 Gm17153-201ENSMUST00000171314 490 ntBASIC5.06□□□□□ -1.6
Traf1P39428 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC5.06□□□□□ -1.6
Traf1P39428 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC5.06□□□□□ -1.6
Traf1P39428 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Traf1P39428 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Traf1P39428 Gm9775-201ENSMUST00000189402 331 ntBASIC5.06□□□□□ -1.6
Traf1P39428 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC5.06□□□□□ -1.6
Traf1P39428 Gm38270-201ENSMUST00000192721 407 ntBASIC5.06□□□□□ -1.6
Traf1P39428 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC5.06□□□□□ -1.6
Traf1P39428 Trbv11-201ENSMUST00000194354 260 ntBASIC5.06□□□□□ -1.6
Traf1P39428 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC5.06□□□□□ -1.6
Traf1P39428 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms