Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC6.28□□□□□ -1.4
Col18a1P39061 AC124569.3-201ENSMUST00000224860 1621 ntBASIC6.28□□□□□ -1.4
Col18a1P39061 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Col18a1P39061 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Col18a1P39061 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col18a1P39061 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col18a1P39061 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col18a1P39061 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col18a1P39061 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Col18a1P39061 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col18a1P39061 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC6.28□□□□□ -1.4
Col18a1P39061 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col18a1P39061 Gm37668-201ENSMUST00000193745 1944 ntBASIC6.28□□□□□ -1.4
Col18a1P39061 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col18a1P39061 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col18a1P39061 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Col18a1P39061 Gm11372-201ENSMUST00000117348 570 ntBASIC6.28□□□□□ -1.4
Col18a1P39061 Gm14831-201ENSMUST00000120253 409 ntBASIC6.28□□□□□ -1.4
Col18a1P39061 Gm22434-201ENSMUST00000158549 122 ntBASIC6.28□□□□□ -1.4
Col18a1P39061 Gm27803-201ENSMUST00000183763 119 ntBASIC6.28□□□□□ -1.4
Col18a1P39061 Gm27538-201ENSMUST00000185065 294 ntBASIC6.28□□□□□ -1.4
Col18a1P39061 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC6.28□□□□□ -1.4
Col18a1P39061 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC6.28□□□□□ -1.4
Col18a1P39061 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC6.28□□□□□ -1.4
Col18a1P39061 Gm44583-201ENSMUST00000207478 281 ntBASIC6.28□□□□□ -1.4
Col18a1P39061 AC152951.1-201ENSMUST00000218907 266 ntBASIC6.28□□□□□ -1.4
Col18a1P39061 AC119241.1-201ENSMUST00000223651 534 ntBASIC6.28□□□□□ -1.4
Col18a1P39061 AC133654.1-201ENSMUST00000228411 672 ntBASIC6.28□□□□□ -1.4
Col18a1P39061 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col18a1P39061 Gm17137-201ENSMUST00000164106 4371 ntBASIC6.28□□□□□ -1.4
Col18a1P39061 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col18a1P39061 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col18a1P39061 Gm43437-201ENSMUST00000198535 3955 ntBASIC6.28□□□□□ -1.4
Col18a1P39061 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col18a1P39061 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col18a1P39061 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Col18a1P39061 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col18a1P39061 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
Col18a1P39061 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col18a1P39061 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col18a1P39061 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC6.27□□□□□ -1.41
Col18a1P39061 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Col18a1P39061 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC6.27□□□□□ -1.41
Col18a1P39061 Gm43781-201ENSMUST00000197634 2681 ntBASIC6.27□□□□□ -1.41
Col18a1P39061 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col18a1P39061 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col18a1P39061 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col18a1P39061 Gm43088-201ENSMUST00000197530 2347 ntBASIC6.27□□□□□ -1.41
Col18a1P39061 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Col18a1P39061 Gm14981-201ENSMUST00000117325 943 ntBASIC6.27□□□□□ -1.41
Col18a1P39061 Gm15659-201ENSMUST00000118881 341 ntBASIC6.27□□□□□ -1.41
Col18a1P39061 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC6.27□□□□□ -1.41
Col18a1P39061 Gm24998-201ENSMUST00000157908 89 ntBASIC6.27□□□□□ -1.41
Col18a1P39061 Gm25902-201ENSMUST00000158493 318 ntBASIC6.27□□□□□ -1.41
Col18a1P39061 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col18a1P39061 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC6.27□□□□□ -1.41
Col18a1P39061 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Col18a1P39061 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC6.27□□□□□ -1.41
Col18a1P39061 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Col18a1P39061 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Col18a1P39061 Gm27645-201ENSMUST00000183348 77 ntBASIC6.27□□□□□ -1.41
Col18a1P39061 Gm18727-201ENSMUST00000185981 553 ntBASIC6.27□□□□□ -1.41
Col18a1P39061 Gm29490-201ENSMUST00000190923 342 ntBASIC6.27□□□□□ -1.41
Col18a1P39061 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC6.27□□□□□ -1.41
Col18a1P39061 Gm43828-201ENSMUST00000196890 639 ntBASIC6.27□□□□□ -1.41
Col18a1P39061 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC6.27□□□□□ -1.41
Col18a1P39061 AC140344.1-201ENSMUST00000223384 387 ntBASIC6.27□□□□□ -1.41
Col18a1P39061 AC124562.1-201ENSMUST00000224673 337 ntBASIC6.27□□□□□ -1.41
Col18a1P39061 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col18a1P39061 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col18a1P39061 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col18a1P39061 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col18a1P39061 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col18a1P39061 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Col18a1P39061 Mast4-201ENSMUST00000099202 7709 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Col18a1P39061 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col18a1P39061 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col18a1P39061 AC144772.2-201ENSMUST00000228830 2859 ntBASIC6.27□□□□□ -1.41
Col18a1P39061 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col18a1P39061 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC6.26□□□□□ -1.41
Col18a1P39061 Gm14678-201ENSMUST00000121396 482 ntBASIC6.26□□□□□ -1.41
Col18a1P39061 Gm25572-201ENSMUST00000157527 172 ntBASIC6.26□□□□□ -1.41
Col18a1P39061 Gm23082-201ENSMUST00000157852 133 ntBASIC6.26□□□□□ -1.41
Col18a1P39061 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col18a1P39061 Gm8919-201ENSMUST00000182028 1014 ntBASIC6.26□□□□□ -1.41
Col18a1P39061 Gm37828-201ENSMUST00000192496 432 ntBASIC6.26□□□□□ -1.41
Col18a1P39061 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC6.26□□□□□ -1.41
Col18a1P39061 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC6.26□□□□□ -1.41
Col18a1P39061 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC6.26□□□□□ -1.41
Col18a1P39061 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC6.26□□□□□ -1.41
Col18a1P39061 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col18a1P39061 Gm5548-201ENSMUST00000055878 397 ntBASIC6.26□□□□□ -1.41
Col18a1P39061 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC6.26□□□□□ -1.41
Col18a1P39061 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col18a1P39061 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC6.26□□□□□ -1.41
Col18a1P39061 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col18a1P39061 Gm37357-201ENSMUST00000192386 3123 ntBASIC6.26□□□□□ -1.41
Col18a1P39061 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col18a1P39061 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Col18a1P39061 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms