Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC6.13□□□□□ -1.43
Pde6bP23440 Gm22261-201ENSMUST00000158691 324 ntBASIC6.13□□□□□ -1.43
Pde6bP23440 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC6.13□□□□□ -1.43
Pde6bP23440 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC6.13□□□□□ -1.43
Pde6bP23440 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC6.13□□□□□ -1.43
Pde6bP23440 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Pde6bP23440 Gm22650-201ENSMUST00000175138 105 ntBASIC6.13□□□□□ -1.43
Pde6bP23440 Gm5139-201ENSMUST00000175943 249 ntBASIC6.13□□□□□ -1.43
Pde6bP23440 Gm7094-201ENSMUST00000178379 366 ntBASIC6.13□□□□□ -1.43
Pde6bP23440 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Pde6bP23440 Gm28429-201ENSMUST00000188521 363 ntBASIC6.13□□□□□ -1.43
Pde6bP23440 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC6.13□□□□□ -1.43
Pde6bP23440 Gm18553-201ENSMUST00000194152 634 ntBASIC6.13□□□□□ -1.43
Pde6bP23440 Gm29813-201ENSMUST00000195856 447 ntBASIC6.13□□□□□ -1.43
Pde6bP23440 Gm44319-201ENSMUST00000196974 93 ntBASIC6.13□□□□□ -1.43
Pde6bP23440 Gm43712-201ENSMUST00000198020 291 ntBASIC6.13□□□□□ -1.43
Pde6bP23440 Gm18007-201ENSMUST00000205019 844 ntBASIC6.13□□□□□ -1.43
Pde6bP23440 Gm44634-201ENSMUST00000206119 152 ntBASIC6.13□□□□□ -1.43
Pde6bP23440 Gm44923-201ENSMUST00000206673 85 ntBASIC6.13□□□□□ -1.43
Pde6bP23440 Gm5735-201ENSMUST00000207053 167 ntBASIC6.13□□□□□ -1.43
Pde6bP23440 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC6.13□□□□□ -1.43
Pde6bP23440 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC6.13□□□□□ -1.43
Pde6bP23440 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC6.13□□□□□ -1.43
Pde6bP23440 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Pde6bP23440 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC6.13□□□□□ -1.43
Pde6bP23440 AC154452.1-201ENSMUST00000225819 241 ntBASIC6.13□□□□□ -1.43
Pde6bP23440 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Pde6bP23440 n-R5s173-201ENSMUST00000082620 119 ntBASIC6.13□□□□□ -1.43
Pde6bP23440 Gm22265-201ENSMUST00000082947 116 ntBASIC6.13□□□□□ -1.43
Pde6bP23440 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC6.13□□□□□ -1.43
Pde6bP23440 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Pde6bP23440 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC6.13□□□□□ -1.43
Pde6bP23440 Gm19035-201ENSMUST00000193299 1742 ntBASIC6.13□□□□□ -1.43
Pde6bP23440 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Pde6bP23440 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Pde6bP23440 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Pde6bP23440 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
Pde6bP23440 Gm37769-201ENSMUST00000193753 2369 ntBASIC6.13□□□□□ -1.43
Pde6bP23440 AC156031.1-201ENSMUST00000217288 2555 ntBASIC6.12□□□□□ -1.43
Pde6bP23440 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Pde6bP23440 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pde6bP23440 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pde6bP23440 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Pde6bP23440 Gm14987-201ENSMUST00000117820 676 ntBASIC6.12□□□□□ -1.43
Pde6bP23440 Gm13681-201ENSMUST00000117925 210 ntBASIC6.12□□□□□ -1.43
Pde6bP23440 Gm7421-201ENSMUST00000119298 639 ntBASIC6.12□□□□□ -1.43
Pde6bP23440 Gm13488-201ENSMUST00000120419 179 ntBASIC6.12□□□□□ -1.43
Pde6bP23440 Gm7365-201ENSMUST00000120877 639 ntBASIC6.12□□□□□ -1.43
Pde6bP23440 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC6.12□□□□□ -1.43
Pde6bP23440 Gm9225-201ENSMUST00000121921 836 ntBASIC6.12□□□□□ -1.43
Pde6bP23440 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Pde6bP23440 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Pde6bP23440 Ear-ps7-201ENSMUST00000161287 442 ntBASIC6.12□□□□□ -1.43
Pde6bP23440 Gm3141-201ENSMUST00000168726 499 ntBASIC6.12□□□□□ -1.43
Pde6bP23440 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Pde6bP23440 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC6.12□□□□□ -1.43
Pde6bP23440 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC6.12□□□□□ -1.43
Pde6bP23440 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC6.12□□□□□ -1.43
Pde6bP23440 Gm5527-201ENSMUST00000179821 642 ntBASIC6.12□□□□□ -1.43
Pde6bP23440 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC6.12□□□□□ -1.43
Pde6bP23440 Gm27640-201ENSMUST00000184580 147 ntBASIC6.12□□□□□ -1.43
Pde6bP23440 Gm28058-201ENSMUST00000186421 264 ntBASIC6.12□□□□□ -1.43
Pde6bP23440 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pde6bP23440 Gm19029-201ENSMUST00000189923 564 ntBASIC6.12□□□□□ -1.43
Pde6bP23440 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC6.12□□□□□ -1.43
Pde6bP23440 Gm38362-201ENSMUST00000192999 2064 ntBASIC6.12□□□□□ -1.43
Pde6bP23440 Ighv3-7-201ENSMUST00000193370 348 ntBASIC6.12□□□□□ -1.43
Pde6bP23440 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Pde6bP23440 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Pde6bP23440 Gm45156-201ENSMUST00000207255 439 ntBASIC6.12□□□□□ -1.43
Pde6bP23440 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pde6bP23440 Gm7990-201ENSMUST00000212126 593 ntBASIC6.12□□□□□ -1.43
Pde6bP23440 Gm20786-201ENSMUST00000212649 436 ntBASIC6.12□□□□□ -1.43
Pde6bP23440 AC122905.2-201ENSMUST00000220325 269 ntBASIC6.12□□□□□ -1.43
Pde6bP23440 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Pde6bP23440 AC115878.1-201ENSMUST00000227247 334 ntBASIC6.12□□□□□ -1.43
Pde6bP23440 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pde6bP23440 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Pde6bP23440 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pde6bP23440 Gm23404-201ENSMUST00000082543 97 ntBASIC6.12□□□□□ -1.43
Pde6bP23440 Gm23093-201ENSMUST00000083450 102 ntBASIC6.12□□□□□ -1.43
Pde6bP23440 Gm7676-201ENSMUST00000084055 319 ntBASIC6.12□□□□□ -1.43
Pde6bP23440 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Pde6bP23440 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Pde6bP23440 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pde6bP23440 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pde6bP23440 Gm45644-201ENSMUST00000210255 2740 ntBASIC6.12□□□□□ -1.43
Pde6bP23440 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pde6bP23440 Gm37762-201ENSMUST00000194515 3561 ntBASIC6.11□□□□□ -1.43
Pde6bP23440 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Pde6bP23440 Gm20172-201ENSMUST00000193138 1551 ntBASIC6.11□□□□□ -1.43
Pde6bP23440 AC160115.1-201ENSMUST00000224678 1574 ntBASIC6.11□□□□□ -1.43
Pde6bP23440 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC6.11□□□□□ -1.43
Pde6bP23440 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC6.11□□□□□ -1.43
Pde6bP23440 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pde6bP23440 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pde6bP23440 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Pde6bP23440 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Pde6bP23440 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Pde6bP23440 Gm22273-201ENSMUST00000104040 132 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms