Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Sdc1P18828 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC3.42□□□□□ -1.86
Sdc1P18828 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC3.42□□□□□ -1.86
Sdc1P18828 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Sdc1P18828 Gm28769-201ENSMUST00000190176 615 ntBASIC3.42□□□□□ -1.86
Sdc1P18828 Vmn1r82-202ENSMUST00000191002 918 ntBASIC3.42□□□□□ -1.86
Sdc1P18828 Gm28267-201ENSMUST00000191093 265 ntBASIC3.42□□□□□ -1.86
Sdc1P18828 Gm29038-201ENSMUST00000191543 678 ntBASIC3.42□□□□□ -1.86
Sdc1P18828 Gm37072-201ENSMUST00000194570 837 ntBASIC3.42□□□□□ -1.86
Sdc1P18828 Gm44343-201ENSMUST00000196702 90 ntBASIC3.42□□□□□ -1.86
Sdc1P18828 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Sdc1P18828 Gm42526-201ENSMUST00000198956 393 ntBASIC3.42□□□□□ -1.86
Sdc1P18828 Mir6906-201ENSMUST00000198998 58 ntBASIC3.42□□□□□ -1.86
Sdc1P18828 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC3.42□□□□□ -1.86
Sdc1P18828 Gm43651-201ENSMUST00000199796 439 ntBASIC3.42□□□□□ -1.86
Sdc1P18828 Gm18877-201ENSMUST00000207706 539 ntBASIC3.42□□□□□ -1.86
Sdc1P18828 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC3.42□□□□□ -1.86
Sdc1P18828 Gm45610-201ENSMUST00000209227 784 ntBASIC3.42□□□□□ -1.86
Sdc1P18828 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC3.42□□□□□ -1.86
Sdc1P18828 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC3.42□□□□□ -1.86
Sdc1P18828 AC123832.2-201ENSMUST00000215151 129 ntBASIC3.42□□□□□ -1.86
Sdc1P18828 AC156832.3-201ENSMUST00000215591 435 ntBASIC3.42□□□□□ -1.86
Sdc1P18828 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC3.42□□□□□ -1.86
Sdc1P18828 CT025680.1-201ENSMUST00000217375 375 ntBASIC3.42□□□□□ -1.86
Sdc1P18828 AC153975.1-201ENSMUST00000220087 926 ntBASIC3.42□□□□□ -1.86
Sdc1P18828 AC127242.4-201ENSMUST00000221242 470 ntBASIC3.42□□□□□ -1.86
Sdc1P18828 AC151730.2-201ENSMUST00000224027 475 ntBASIC3.42□□□□□ -1.86
Sdc1P18828 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.42□□□□□ -1.86
Sdc1P18828 Gm24031-201ENSMUST00000083930 131 ntBASIC3.42□□□□□ -1.86
Sdc1P18828 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Sdc1P18828 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Sdc1P18828 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Sdc1P18828 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Sdc1P18828 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Sdc1P18828 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Sdc1P18828 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
Sdc1P18828 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Sdc1P18828 Gm42991-201ENSMUST00000196468 3837 ntBASIC3.41□□□□□ -1.86
Sdc1P18828 Gm6215-201ENSMUST00000119297 1386 ntBASIC3.41□□□□□ -1.86
Sdc1P18828 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Sdc1P18828 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Sdc1P18828 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.41□□□□□ -1.86
Sdc1P18828 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Sdc1P18828 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Sdc1P18828 Gm11406-201ENSMUST00000117418 484 ntBASIC3.41□□□□□ -1.86
Sdc1P18828 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC3.41□□□□□ -1.86
Sdc1P18828 Gm8595-201ENSMUST00000118250 630 ntBASIC3.41□□□□□ -1.86
Sdc1P18828 Gm13478-201ENSMUST00000118312 413 ntBASIC3.41□□□□□ -1.86
Sdc1P18828 Gm13064-201ENSMUST00000119125 557 ntBASIC3.41□□□□□ -1.86
Sdc1P18828 Gm5943-201ENSMUST00000119458 459 ntBASIC3.41□□□□□ -1.86
Sdc1P18828 Gm22988-201ENSMUST00000122759 144 ntBASIC3.41□□□□□ -1.86
Sdc1P18828 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Sdc1P18828 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC3.41□□□□□ -1.86
Sdc1P18828 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC3.41□□□□□ -1.86
Sdc1P18828 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC3.41□□□□□ -1.86
Sdc1P18828 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC3.41□□□□□ -1.86
Sdc1P18828 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC3.41□□□□□ -1.86
Sdc1P18828 Gm25278-201ENSMUST00000157267 120 ntBASIC3.41□□□□□ -1.86
Sdc1P18828 Gm25185-201ENSMUST00000157754 96 ntBASIC3.41□□□□□ -1.86
Sdc1P18828 Gm23030-201ENSMUST00000158004 273 ntBASIC3.41□□□□□ -1.86
Sdc1P18828 Gm17043-201ENSMUST00000164621 1283 ntBASIC3.41□□□□□ -1.86
Sdc1P18828 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC3.41□□□□□ -1.86
Sdc1P18828 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC3.41□□□□□ -1.86
Sdc1P18828 Gm7094-201ENSMUST00000178379 366 ntBASIC3.41□□□□□ -1.86
Sdc1P18828 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC3.41□□□□□ -1.86
Sdc1P18828 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC3.41□□□□□ -1.86
Sdc1P18828 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC3.41□□□□□ -1.86
Sdc1P18828 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC3.41□□□□□ -1.86
Sdc1P18828 Gm21735-201ENSMUST00000190360 696 ntBASIC3.41□□□□□ -1.86
Sdc1P18828 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC3.41□□□□□ -1.86
Sdc1P18828 Gm19418-201ENSMUST00000197436 580 ntBASIC3.41□□□□□ -1.86
Sdc1P18828 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC3.41□□□□□ -1.86
Sdc1P18828 Gm42850-201ENSMUST00000202094 201 ntBASIC3.41□□□□□ -1.86
Sdc1P18828 Gm44092-201ENSMUST00000204470 258 ntBASIC3.41□□□□□ -1.86
Sdc1P18828 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
Sdc1P18828 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC3.41□□□□□ -1.86
Sdc1P18828 AC153544.1-201ENSMUST00000217988 400 ntBASIC3.41□□□□□ -1.86
Sdc1P18828 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC3.41□□□□□ -1.86
Sdc1P18828 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC3.41□□□□□ -1.86
Sdc1P18828 AC158392.1-201ENSMUST00000223720 1069 ntBASIC3.41□□□□□ -1.86
Sdc1P18828 AC139750.2-201ENSMUST00000224424 386 ntBASIC3.41□□□□□ -1.86
Sdc1P18828 AC170086.1-201ENSMUST00000225190 497 ntBASIC3.41□□□□□ -1.86
Sdc1P18828 AC150560.2-201ENSMUST00000227208 171 ntBASIC3.41□□□□□ -1.86
Sdc1P18828 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Sdc1P18828 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Sdc1P18828 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Sdc1P18828 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
Sdc1P18828 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Sdc1P18828 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Sdc1P18828 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC3.41□□□□□ -1.86
Sdc1P18828 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Sdc1P18828 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Sdc1P18828 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.86
Sdc1P18828 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Sdc1P18828 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.4□□□□□ -1.86
Sdc1P18828 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
Sdc1P18828 Mir92b-201ENSMUST00000102300 83 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Sdc1P18828 Gm13058-201ENSMUST00000117097 1435 ntBASIC3.4□□□□□ -1.87
Sdc1P18828 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms