Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm25525-201ENSMUST00000177701 107 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 Gm26178-201ENSMUST00000177706 107 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 Gm26465-201ENSMUST00000178517 107 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 Gm24317-201ENSMUST00000178536 107 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 Gm25021-201ENSMUST00000179184 107 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 Gm22995-201ENSMUST00000179670 107 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 Gm24424-201ENSMUST00000179714 107 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Cdx1P18111 Gm24389-201ENSMUST00000179962 107 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 Gm25672-201ENSMUST00000180111 107 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Cdx1P18111 Gm21960-201ENSMUST00000181924 452 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 Gm4842-201ENSMUST00000183237 835 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Cdx1P18111 Gm29163-201ENSMUST00000188029 107 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 Gm9722-201ENSMUST00000194568 802 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC3.62□□□□□ -1.83
Cdx1P18111 Gm8458-201ENSMUST00000196658 819 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC3.62□□□□□ -1.83
Cdx1P18111 Gm43136-201ENSMUST00000200403 636 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 Gm6719-201ENSMUST00000202067 335 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 Gm43975-201ENSMUST00000203023 481 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Cdx1P18111 Gm44583-201ENSMUST00000207478 281 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Cdx1P18111 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC3.62□□□□□ -1.83
Cdx1P18111 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC3.62□□□□□ -1.83
Cdx1P18111 Gm7045-201ENSMUST00000221466 605 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 Gm7040-201ENSMUST00000223271 443 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 AC241593.2-201ENSMUST00000225099 510 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 AC154527.3-201ENSMUST00000225519 989 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 CT009711.3-201ENSMUST00000225882 250 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 CT009600.2-201ENSMUST00000226638 481 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Cdx1P18111 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Cdx1P18111 Gm23815-201ENSMUST00000083231 107 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 Gm23520-201ENSMUST00000093736 107 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Cdx1P18111 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.62□□□□□ -1.83
Cdx1P18111 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
Cdx1P18111 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Cdx1P18111 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC3.62□□□□□ -1.83
Cdx1P18111 Gm7452-202ENSMUST00000202891 3039 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Cdx1P18111 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Cdx1P18111 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Cdx1P18111 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Cdx1P18111 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Cdx1P18111 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Cdx1P18111 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Cdx1P18111 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Cdx1P18111 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Cdx1P18111 Gm22657-201ENSMUST00000104197 132 ntBASIC3.61□□□□□ -1.83
Cdx1P18111 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Cdx1P18111 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Cdx1P18111 Gm11406-201ENSMUST00000117418 484 ntBASIC3.61□□□□□ -1.83
Cdx1P18111 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC3.61□□□□□ -1.83
Cdx1P18111 Gm11433-201ENSMUST00000118318 228 ntBASIC3.61□□□□□ -1.83
Cdx1P18111 Gm15390-201ENSMUST00000120323 738 ntBASIC3.61□□□□□ -1.83
Cdx1P18111 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC3.61□□□□□ -1.83
Cdx1P18111 Gm15075-201ENSMUST00000122187 477 ntBASIC3.61□□□□□ -1.83
Cdx1P18111 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Cdx1P18111 Magea9-ps-201ENSMUST00000140655 732 ntBASIC3.61□□□□□ -1.83
Cdx1P18111 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Cdx1P18111 Gm25605-201ENSMUST00000158364 124 ntBASIC3.61□□□□□ -1.83
Cdx1P18111 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Cdx1P18111 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC3.61□□□□□ -1.83
Cdx1P18111 Mir6416-201ENSMUST00000183664 117 ntBASIC3.61□□□□□ -1.83
Cdx1P18111 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC3.61□□□□□ -1.83
Cdx1P18111 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC3.61□□□□□ -1.83
Cdx1P18111 Gm43018-201ENSMUST00000198075 1275 ntBASIC3.61□□□□□ -1.83
Cdx1P18111 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC3.61□□□□□ -1.83
Cdx1P18111 Gm9655-201ENSMUST00000211321 1284 ntBASIC3.61□□□□□ -1.83
Cdx1P18111 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC3.61□□□□□ -1.83
Cdx1P18111 Gm4928-201ENSMUST00000219622 850 ntBASIC3.61□□□□□ -1.83
Cdx1P18111 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Cdx1P18111 AC160931.2-201ENSMUST00000221445 351 ntBASIC3.61□□□□□ -1.83
Cdx1P18111 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.61□□□□□ -1.83
Cdx1P18111 AC125399.1-201ENSMUST00000224236 595 ntBASIC3.61□□□□□ -1.83
Cdx1P18111 AC170086.1-201ENSMUST00000225190 497 ntBASIC3.61□□□□□ -1.83
Cdx1P18111 AC138765.1-201ENSMUST00000228657 385 ntBASIC3.61□□□□□ -1.83
Cdx1P18111 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Cdx1P18111 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Cdx1P18111 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Cdx1P18111 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Cdx1P18111 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Cdx1P18111 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Cdx1P18111 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Cdx1P18111 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Cdx1P18111 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Cdx1P18111 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.61□□□□□ -1.83
Cdx1P18111 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Cdx1P18111 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Cdx1P18111 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC3.61□□□□□ -1.83
Cdx1P18111 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Cdx1P18111 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Cdx1P18111 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.6□□□□□ -1.83
Cdx1P18111 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC3.6□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms