Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm2092-201ENSMUST00000178887 639 ntBASIC6.06□□□□□ -1.44
RaraP11416 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
RaraP11416 Gm2759-201ENSMUST00000179938 639 ntBASIC6.06□□□□□ -1.44
RaraP11416 Gm14596-201ENSMUST00000180268 537 ntBASIC6.06□□□□□ -1.44
RaraP11416 Gm14595-201ENSMUST00000180335 537 ntBASIC6.06□□□□□ -1.44
RaraP11416 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RaraP11416 Gm29038-201ENSMUST00000191543 678 ntBASIC6.06□□□□□ -1.44
RaraP11416 Gm37616-201ENSMUST00000193974 322 ntBASIC6.06□□□□□ -1.44
RaraP11416 Gm43418-201ENSMUST00000201334 428 ntBASIC6.06□□□□□ -1.44
RaraP11416 Gm43105-201ENSMUST00000202987 459 ntBASIC6.06□□□□□ -1.44
RaraP11416 Gm44041-201ENSMUST00000203678 396 ntBASIC6.06□□□□□ -1.44
RaraP11416 Gm19880-201ENSMUST00000207731 318 ntBASIC6.06□□□□□ -1.44
RaraP11416 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RaraP11416 Gm45814-201ENSMUST00000212646 775 ntBASIC6.06□□□□□ -1.44
RaraP11416 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
RaraP11416 Gm18120-201ENSMUST00000220079 511 ntBASIC6.06□□□□□ -1.44
RaraP11416 Gm5457-201ENSMUST00000022260 333 ntBASIC6.06□□□□□ -1.44
RaraP11416 AC141884.1-201ENSMUST00000226327 636 ntBASIC6.06□□□□□ -1.44
RaraP11416 AC154738.4-201ENSMUST00000228310 414 ntBASIC6.06□□□□□ -1.44
RaraP11416 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RaraP11416 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
RaraP11416 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RaraP11416 Gm24622-201ENSMUST00000082619 162 ntBASIC6.06□□□□□ -1.44
RaraP11416 Gm25133-201ENSMUST00000082647 130 ntBASIC6.06□□□□□ -1.44
RaraP11416 Snora30-201ENSMUST00000083325 130 ntBASIC6.06□□□□□ -1.44
RaraP11416 Gm23733-201ENSMUST00000083750 106 ntBASIC6.06□□□□□ -1.44
RaraP11416 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
RaraP11416 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RaraP11416 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
RaraP11416 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
RaraP11416 AC116726.1-201ENSMUST00000215028 3497 ntBASIC6.06□□□□□ -1.44
RaraP11416 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
RaraP11416 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
RaraP11416 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
RaraP11416 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RaraP11416 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
RaraP11416 Gm42503-201ENSMUST00000199080 3706 ntBASIC6.05□□□□□ -1.44
RaraP11416 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
RaraP11416 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC6.05□□□□□ -1.44
RaraP11416 Gm20486-201ENSMUST00000101544 128 ntBASIC6.05□□□□□ -1.44
RaraP11416 Gm25088-201ENSMUST00000101803 79 ntBASIC6.05□□□□□ -1.44
RaraP11416 Mir208b-201ENSMUST00000104735 77 ntBASIC6.05□□□□□ -1.44
RaraP11416 Gm25316-201ENSMUST00000116826 118 ntBASIC6.05□□□□□ -1.44
RaraP11416 Gm14681-201ENSMUST00000118047 411 ntBASIC6.05□□□□□ -1.44
RaraP11416 Gm11826-201ENSMUST00000118781 438 ntBASIC6.05□□□□□ -1.44
RaraP11416 Gm5942-201ENSMUST00000120046 439 ntBASIC6.05□□□□□ -1.44
RaraP11416 Gm22073-201ENSMUST00000122668 189 ntBASIC6.05□□□□□ -1.44
RaraP11416 Gm14364-201ENSMUST00000129209 267 ntBASIC6.05□□□□□ -1.44
RaraP11416 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC6.05□□□□□ -1.44
RaraP11416 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC6.05□□□□□ -1.44
RaraP11416 Gm24419-201ENSMUST00000157875 332 ntBASIC6.05□□□□□ -1.44
RaraP11416 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RaraP11416 Gm8161-201ENSMUST00000168739 481 ntBASIC6.05□□□□□ -1.44
RaraP11416 Mir5125-201ENSMUST00000175240 79 ntBASIC6.05□□□□□ -1.44
RaraP11416 Gm26866-201ENSMUST00000180414 802 ntBASIC6.05□□□□□ -1.44
RaraP11416 Gm27148-201ENSMUST00000185086 160 ntBASIC6.05□□□□□ -1.44
RaraP11416 Gm28527-201ENSMUST00000185210 297 ntBASIC6.05□□□□□ -1.44
RaraP11416 Gm28390-201ENSMUST00000185212 700 ntBASIC6.05□□□□□ -1.44
RaraP11416 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC6.05□□□□□ -1.44
RaraP11416 Gm21088-201ENSMUST00000190875 316 ntBASIC6.05□□□□□ -1.44
RaraP11416 AC157822.1-201ENSMUST00000196643 80 ntBASIC6.05□□□□□ -1.44
RaraP11416 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC6.05□□□□□ -1.44
RaraP11416 Gm29754-201ENSMUST00000206269 358 ntBASIC6.05□□□□□ -1.44
RaraP11416 Gm45590-201ENSMUST00000209715 262 ntBASIC6.05□□□□□ -1.44
RaraP11416 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC6.05□□□□□ -1.44
RaraP11416 Gm8423-201ENSMUST00000211387 607 ntBASIC6.05□□□□□ -1.44
RaraP11416 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC6.05□□□□□ -1.44
RaraP11416 Gm45439-201ENSMUST00000211723 359 ntBASIC6.05□□□□□ -1.44
RaraP11416 Gm45722-201ENSMUST00000213075 466 ntBASIC6.05□□□□□ -1.44
RaraP11416 Gm7034-201ENSMUST00000218638 645 ntBASIC6.05□□□□□ -1.44
RaraP11416 Gm8613-201ENSMUST00000220383 1077 ntBASIC6.05□□□□□ -1.44
RaraP11416 AC126685.1-201ENSMUST00000221001 121 ntBASIC6.05□□□□□ -1.44
RaraP11416 AC156037.1-201ENSMUST00000221133 127 ntBASIC6.05□□□□□ -1.44
RaraP11416 AC125543.3-201ENSMUST00000221991 126 ntBASIC6.05□□□□□ -1.44
RaraP11416 CT010506.2-201ENSMUST00000225618 183 ntBASIC6.05□□□□□ -1.44
RaraP11416 AC161609.1-201ENSMUST00000225878 474 ntBASIC6.05□□□□□ -1.44
RaraP11416 CT025689.4-201ENSMUST00000225926 601 ntBASIC6.05□□□□□ -1.44
RaraP11416 AC154657.1-201ENSMUST00000226394 775 ntBASIC6.05□□□□□ -1.44
RaraP11416 AC166369.1-201ENSMUST00000228126 351 ntBASIC6.05□□□□□ -1.44
RaraP11416 Gm22572-201ENSMUST00000082985 105 ntBASIC6.05□□□□□ -1.44
RaraP11416 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
RaraP11416 Gm3616-201ENSMUST00000174430 2514 ntBASIC6.05□□□□□ -1.44
RaraP11416 Gm3683-201ENSMUST00000175701 2513 ntBASIC6.05□□□□□ -1.44
RaraP11416 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RaraP11416 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC6.05□□□□□ -1.44
RaraP11416 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
RaraP11416 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RaraP11416 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RaraP11416 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RaraP11416 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
RaraP11416 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
RaraP11416 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC6.05□□□□□ -1.44
RaraP11416 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
RaraP11416 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RaraP11416 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
RaraP11416 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RaraP11416 Gm38299-201ENSMUST00000193214 3789 ntBASIC6.05□□□□□ -1.44
RaraP11416 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RaraP11416 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
RaraP11416 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 100.4 ms